Detailed information NTG0475872

Bioinformatically predicted

Overview

• Name: med
• Type: Regulator
• Locus tag: H8S71_RS06025
• Genome accession: NZ_CP060417
• Coordinates: 1171289..1172242 (+)
• Length: 317 a.a.
• NCBI ID: WP_014476425.1
• Uniprot ID: A0A0K6M9I2
• Organism: Bacillus subtilis subsp. subtilis strain ONU 559
• Function: regulation of regulators (predicted from homology) Competence regulation

Genomic Context

Location: 1166289..1177242

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H8S71_RS06000 (H8S71_05995)	argF	1168122..1169081 (+)	960	WP_187002181.1	ornithine carbamoyltransferase	-
H8S71_RS06005 (H8S71_06000)	yjzC	1169167..1169346 (+)	180	WP_003245356.1	YjzC family protein	-
H8S71_RS06010 (H8S71_06005)	yjzD	1169392..1169577 (-)	186	WP_003245236.1	DUF2929 domain-containing protein	-
H8S71_RS06015 (H8S71_06010)	-	1169826..1170560 (+)	735	WP_014479433.1	hypothetical protein	-
H8S71_RS06020 (H8S71_06015)	-	1170642..1171199 (+)	558	WP_014476424.1	hypothetical protein	-
H8S71_RS06025 (H8S71_06020)	med	1171289..1172242 (+)	954	WP_014476425.1	transcriptional regulator Med	Regulator
H8S71_RS06030 (H8S71_06025)	comZ	1172257..1172448 (+)	192	WP_072175657.1	ComG operon transcriptional repressor ComZ	Regulator
H8S71_RS06035 (H8S71_06030)	yjzB	1172478..1172705 (-)	228	WP_121591633.1	spore coat protein YjzB	-
H8S71_RS06040 (H8S71_06035)	fabH	1172870..1173808 (+)	939	WP_003232971.1	beta-ketoacyl-ACP synthase III	-
H8S71_RS06045 (H8S71_06040)	fabF	1173831..1175072 (+)	1242	WP_003244890.1	beta-ketoacyl-ACP synthase II	-
H8S71_RS06050 (H8S71_06045)	yjaZ	1175148..1175933 (+)	786	WP_021479557.1	DUF2268 domain-containing protein	-
H8S71_RS06055 (H8S71_06050)	appD	1176125..1177111 (+)	987	WP_003232965.1	oligopeptide ABC transporter ATP-binding protein AppD	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 35310.84 Da
• Isoelectric Point: 4.6031

>NTDB_id=475872 H8S71_RS06025 WP_014476425.1 1171289..1172242(+) (med) [Bacillus subtilis subsp. subtilis strain ONU 559]
MITRLVMIFSVLLLLSGCGQTPFKGKIEKVGMLFPDTINDLVWGTKGYKGLLNIQSKYNVDVYYKEGVKTEEDIINAIED
FHKRGVNLLYGHGSEYAEVFNLVGEDYPDMEFVISNAKAKADNVTSVHFSGEAMGFFGGMTAAHMSKTNQVGVIASFTWQ
PEVDGFIKGAKYENPDIEVNTKYTDHWDDDTTAVKLYQKMKNEGADVVYPAGDGYNVPVIQQIKKDGLYAIGYVTDQSDL
GENTVLTSTVQNVDKAYEIIAEQFNKGTLEGGDHYYDLNTGVVEMGTFSPLVDKDFQQRIAKLIKTYNKTGELPKNE

Nucleotide

• Length: 954 bp

>NTDB_id=475872 H8S71_RS06025 WP_014476425.1 1171289..1172242(+) (med) [Bacillus subtilis subsp. subtilis strain ONU 559]
TTGATCACAAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGTGGATGTGGACAAACTCCGTTCAAAGGAAAAAT
TGAGAAGGTCGGCATGCTCTTTCCTGATACGATTAATGACCTCGTATGGGGTACAAAAGGGTATAAAGGATTACTGAATA
TACAATCCAAATACAATGTGGACGTCTATTATAAAGAAGGCGTTAAAACAGAAGAAGATATCATAAATGCGATTGAGGAT
TTTCATAAGAGGGGCGTCAATCTGCTCTACGGCCATGGGAGTGAATATGCTGAGGTGTTTAACTTGGTCGGCGAAGATTA
TCCAGATATGGAATTCGTCATTTCCAATGCGAAAGCGAAAGCTGATAATGTAACGAGTGTCCATTTTAGCGGGGAAGCAA
TGGGCTTTTTTGGAGGAATGACTGCTGCCCATATGTCGAAAACGAATCAGGTCGGTGTAATTGCTTCCTTTACGTGGCAG
CCTGAGGTTGACGGTTTTATCAAAGGGGCCAAGTATGAAAATCCGGATATAGAGGTAAATACGAAATATACGGATCATTG
GGATGATGATACAACAGCAGTAAAGCTTTATCAGAAAATGAAGAACGAAGGCGCGGATGTTGTGTATCCCGCCGGAGACG
GGTATAATGTTCCTGTTATTCAGCAAATCAAAAAAGACGGTCTTTATGCCATTGGTTACGTCACAGATCAATCGGATCTG
GGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTTAATAAAGG
CACCCTTGAGGGCGGCGATCATTACTACGACCTGAATACGGGAGTCGTTGAGATGGGAACATTCAGCCCGCTCGTCGATA
AAGACTTTCAGCAAAGAATCGCTAAGCTGATCAAAACATACAACAAAACAGGCGAGCTGCCAAAAAACGAGTAA

Domains

Predicted by InterproScan.

• ABC transporter substrate-binding protein PnrA-like (Bmp) (27-317)

3D structure

• AlphaFold DB: A0A0K6M9I2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
med	Bacillus subtilis subsp. subtilis str. 168	99.685	100	0.997