Detailed information    

insolico Bioinformatically predicted

Overview

Name   comL   Type   Machinery gene
Locus tag   H7A79_RS06350 Genome accession   NZ_CP060414
Coordinates   1198541..1199350 (-) Length   269 a.a.
NCBI ID   WP_187001421.1    Uniprot ID   A0A7H1MBS7
Organism   Neisseria musculi strain NW831     
Function   DNA binding (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1193541..1204350
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H7A79_RS06335 (H7A79_1167) pgmB 1194869..1195543 (+) 675 WP_187001418.1 beta-phosphoglucomutase -
  H7A79_RS06340 (H7A79_1168) htpX 1195800..1196642 (+) 843 WP_187001419.1 protease HtpX -
  H7A79_RS06345 (H7A79_1169) - 1197245..1198453 (+) 1209 WP_187001420.1 amino acid aminotransferase -
  H7A79_RS06350 (H7A79_1170) comL 1198541..1199350 (-) 810 WP_187001421.1 outer membrane protein assembly factor BamD Machinery gene
  H7A79_RS06355 (H7A79_1171) rluD 1199349..1200464 (+) 1116 WP_187001422.1 23S rRNA pseudouridine(1911/1915/1917) synthase RluD -
  H7A79_RS06360 - 1200627..1200911 (+) 285 WP_187001423.1 hypothetical protein -
  H7A79_RS06365 (H7A79_1172) nudB 1200908..1201369 (+) 462 WP_135034553.1 dihydroneopterin triphosphate diphosphatase -
  H7A79_RS06370 (H7A79_1173) hscB 1201452..1201952 (+) 501 WP_187001642.1 Fe-S protein assembly co-chaperone HscB -
  H7A79_RS06375 (H7A79_1174) - 1202071..1202790 (+) 720 WP_353663634.1 hypothetical protein -
  H7A79_RS06380 (H7A79_1175) - 1202783..1203736 (+) 954 WP_135034551.1 nucleoside hydrolase -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 31062.99 Da        Isoelectric Point: 8.8940

>NTDB_id=475824 H7A79_RS06350 WP_187001421.1 1198541..1199350(-) (comL) [Neisseria musculi strain NW831]
MKKILLVAALGLALGGCAGTKGTIDKDAQITQDWTVEKLYAEAHDELNSNNYTRAIKLYEILESRFPNGRYAQQAQLDTA
YAYYKDDEPEKALAAIERFQRNHPQHPNMDYALYLKGLVLFNEDQSFLNKLASQDWSDRDPKANREAYQAFAGLVERYPN
SKYAPDATERMAKLVDALGGNEIAVARYYMKRGAYLAAANRAQKIVERYQNTRFVEESLAIMESSYRKMNKTQLADDTRR
ILAQNFPNSPYLQKPWSESNSIPWWRYWR

Nucleotide


Download         Length: 810 bp        

>NTDB_id=475824 H7A79_RS06350 WP_187001421.1 1198541..1199350(-) (comL) [Neisseria musculi strain NW831]
ATGAAAAAAATTCTTTTAGTGGCTGCTTTAGGCTTGGCTTTGGGCGGCTGCGCCGGCACCAAAGGCACCATTGATAAAGA
TGCCCAAATCACTCAGGATTGGACGGTTGAAAAACTGTATGCCGAGGCTCATGATGAGTTAAACAGCAATAATTATACGC
GAGCCATCAAGTTATATGAAATTTTAGAATCACGCTTTCCCAACGGCCGCTACGCCCAGCAGGCGCAGTTAGACACGGCT
TATGCCTATTATAAAGACGATGAGCCCGAAAAAGCACTGGCCGCCATCGAACGCTTCCAGCGCAACCACCCCCAGCATCC
GAATATGGATTATGCCTTATACCTCAAAGGTTTGGTGCTGTTTAACGAAGACCAGTCGTTTTTAAACAAGCTGGCTTCGC
AAGATTGGTCGGACCGCGACCCGAAAGCCAACCGCGAGGCCTATCAGGCATTTGCCGGGTTGGTGGAACGCTATCCCAAC
AGCAAATACGCGCCCGATGCCACCGAGCGTATGGCGAAGCTGGTGGATGCTTTGGGCGGCAACGAAATCGCCGTGGCCCG
CTATTATATGAAGCGTGGTGCCTATTTGGCCGCTGCCAACCGCGCGCAGAAAATTGTCGAACGGTATCAAAATACCCGTT
TCGTGGAAGAATCGCTGGCGATTATGGAATCTTCTTACCGCAAAATGAACAAAACGCAATTGGCAGACGATACCCGCCGC
ATTTTGGCGCAAAACTTTCCCAACAGCCCCTATCTGCAAAAACCGTGGAGCGAAAGCAACAGTATTCCGTGGTGGCGTTA
TTGGCGTTAA

Domains

Predicted by InterproScan.

Outer membrane lipoprotein (YfiO)

(35-240)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7H1MBS7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comL Neisseria meningitidis MC58

79.104

99.628

0.788
  comL Neisseria gonorrhoeae MS11

78.358

99.628

0.781