Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   H8F01_RS14525 Genome accession   NZ_CP060412
Coordinates   3314998..3315399 (+) Length   133 a.a.
NCBI ID   WP_272942656.1    Uniprot ID   -
Organism   Dyella telluris strain G9     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3309998..3320399
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H8F01_RS14500 (H8F01_14500) - 3310646..3311572 (-) 927 WP_187055798.1 aspartate carbamoyltransferase catalytic subunit -
  H8F01_RS14505 (H8F01_14505) ruvX 3311598..3312029 (-) 432 WP_187055799.1 Holliday junction resolvase RuvX -
  H8F01_RS14510 (H8F01_14510) - 3312026..3312601 (-) 576 WP_187055800.1 YqgE/AlgH family protein -
  H8F01_RS14515 (H8F01_14515) - 3312722..3313588 (-) 867 WP_238480995.1 energy transducer TonB -
  H8F01_RS14520 (H8F01_14520) gshB 3313585..3314562 (-) 978 WP_187055801.1 glutathione synthase -
  H8F01_RS14525 (H8F01_14525) pilG 3314998..3315399 (+) 402 WP_272942656.1 response regulator Regulator
  H8F01_RS14530 (H8F01_14530) - 3315431..3315802 (+) 372 WP_187055802.1 response regulator -
  H8F01_RS14535 (H8F01_14535) - 3315810..3316349 (+) 540 WP_187055803.1 chemotaxis protein CheW -
  H8F01_RS14540 (H8F01_14540) - 3316467..3318497 (+) 2031 WP_187055804.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14617.11 Da        Isoelectric Point: 9.1307

>NTDB_id=475789 H8F01_RS14525 WP_272942656.1 3314998..3315399(+) (pilG) [Dyella telluris strain G9]
MNLNISGNGLAGLKVMVIDDSKTIRRTAETLLKKEGCDVLTAVDGFEALAKISDQKPAIIFVDIMMPRLDGYQTCALIKN
NPQFRGTPVIMLSSKDGLFDKARGRIVGAEQYLTKPFTRDELLGAIHRHVVTV

Nucleotide


Download         Length: 402 bp        

>NTDB_id=475789 H8F01_RS14525 WP_272942656.1 3314998..3315399(+) (pilG) [Dyella telluris strain G9]
GTGAACTTGAATATAAGTGGAAATGGCTTGGCCGGCCTTAAGGTCATGGTTATCGACGACTCGAAAACCATCCGTCGTAC
CGCCGAAACCTTGCTGAAGAAGGAAGGTTGCGACGTGCTCACGGCGGTGGACGGTTTCGAGGCGCTCGCCAAGATCTCCG
ACCAGAAGCCCGCGATCATCTTCGTCGACATCATGATGCCGCGCCTCGACGGCTATCAGACGTGCGCGCTGATCAAGAAC
AACCCGCAGTTCCGCGGGACGCCCGTGATCATGCTGAGCTCGAAGGACGGCCTGTTCGACAAGGCACGCGGGCGCATCGT
GGGCGCAGAACAATACTTGACCAAGCCGTTCACGCGAGATGAACTGCTGGGTGCAATCCATCGACATGTCGTTACGGTTT
AA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(15-126)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

72.358

92.481

0.669
  vicR Streptococcus mutans UA159

41.88

87.97

0.368