Detailed information NTG0475428

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: H7F24_RS02405
• Genome accession: NZ_CP060290
• Coordinates: 445920..447095 (-)
• Length: 391 a.a.
• NCBI ID: WP_003213166.1
• Uniprot ID: -
• Organism: Bacillus sp. PAMC22265
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 440920..452095

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H7F24_RS02375 (H7F24_02375)	-	441088..441507 (-)	420	WP_024423621.1	TIGR03826 family flagellar region protein	-
H7F24_RS02380 (H7F24_02380)	comFC	441565..442221 (-)	657	WP_253207496.1	ComF family protein	Machinery gene
H7F24_RS02385 (H7F24_02385)	-	442248..442541 (-)	294	WP_024423623.1	late competence development ComFB family protein	-
H7F24_RS02390 (H7F24_02390)	comFA	442590..443987 (-)	1398	WP_142927723.1	DEAD/DEAH box helicase	Machinery gene
H7F24_RS02395 (H7F24_02395)	-	444108..444950 (-)	843	WP_024423625.1	DegV family protein	-
H7F24_RS02400 (H7F24_02400)	degU	445166..445855 (-)	690	WP_008348273.1	two-component system response regulator DegU	Regulator
H7F24_RS02405 (H7F24_02405)	degS	445920..447095 (-)	1176	WP_003213166.1	sensor histidine kinase	Regulator
H7F24_RS02410 (H7F24_02410)	-	447316..447984 (+)	669	WP_012011434.1	YigZ family protein	-
H7F24_RS02415 (H7F24_02415)	-	447969..449060 (+)	1092	WP_024423626.1	LCP family protein	-
H7F24_RS02420 (H7F24_02420)	-	449096..450163 (-)	1068	WP_024423627.1	glycosyltransferase family 4 protein	-
H7F24_RS02425 (H7F24_02425)	tuaH	450298..451494 (-)	1197	WP_041108506.1	teichuronic acid biosynthesis protein TuaH	-

Sequence

Protein

• Length: 391 a.a.
• Molecular weight: 45523.25 Da
• Isoelectric Point: 5.8757

>NTDB_id=475428 H7F24_RS02405 WP_003213166.1 445920..447095(-) (degS) [Bacillus sp. PAMC22265]
MTTPKMDPKLLDSIIMKMLSTVDGSKDEVFRIGEQSRQQYESLVEELKQIKQQVNEVIDFGDKLEVHTRHARNRLSEVSR
NFNKFSEEEIREAYEKAHNLQVELTMIQQREKQLRERRDDLERRLLSLQDVIERSETLVSQITVVLNYLNQDLRQVGVLL
EDAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEEGFKEIRSLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLNTIEEYDGKTKITFQCLGDTESERIASQFEVALFRLAQEAVTNSLKHSEAEEISVKVEV
TKDFVTLIIKDDGKGFDMKDVKTNKNKSFGLLGMKERVDLLEGKMTIDSKIGLGTFIMIRVPLTLQNKIVK

Nucleotide

• Length: 1176 bp

>NTDB_id=475428 H7F24_RS02405 WP_003213166.1 445920..447095(-) (degS) [Bacillus sp. PAMC22265]
ATGACAACACCCAAAATGGATCCGAAATTATTGGATTCAATCATCATGAAAATGCTAAGTACAGTTGATGGCAGCAAGGA
CGAAGTATTTAGAATAGGCGAACAGTCCCGTCAACAATATGAAAGCCTAGTAGAAGAGCTGAAGCAAATCAAACAGCAAG
TAAACGAAGTAATTGATTTTGGGGATAAGCTGGAAGTCCATACAAGACATGCTAGAAACCGCTTATCTGAGGTCAGCAGA
AACTTCAACAAATTCAGCGAAGAAGAAATACGTGAGGCCTACGAAAAAGCACATAACTTGCAAGTGGAACTCACCATGAT
TCAGCAGCGCGAGAAGCAGCTGAGAGAAAGAAGAGACGATCTGGAAAGACGATTATTAAGCTTACAAGACGTCATTGAAC
GTTCTGAAACCCTTGTGAGTCAGATTACAGTTGTTCTCAACTATCTCAACCAGGATTTACGCCAGGTTGGCGTTTTACTT
GAAGATGCTCAGGCAAAACAAGATTTTGGGCTGAGAATTATTGAAGCCCAAGAAGAAGAACGCAAAAGAGTGTCTCGGGA
AATTCATGACGGCCCTGCTCAAATGCTGGCAAACGTGATGATGCGTTCCGAATTAATTGAACGGATTTTTAGAGACCGCG
GTACAGAAGAAGGTTTTAAAGAAATTAGAAGTCTCAGACAGAATGTGCGAAATGCACTGTACGAAGTGAGAAGAATCATT
TATGATTTAAGACCGATGGCTTTAGATGATTTGGGTCTGATTCCGACACTGAGAAAATACTTAAACACAATTGAAGAATA
TGATGGGAAAACCAAAATTACGTTCCAATGCCTAGGTGATACAGAAAGCGAAAGAATTGCTTCTCAATTTGAAGTAGCAC
TGTTTAGACTAGCCCAAGAAGCTGTCACAAATTCATTAAAACATTCTGAAGCTGAAGAAATCTCTGTCAAAGTAGAAGTA
ACGAAAGACTTTGTGACCTTAATTATTAAAGACGATGGAAAAGGCTTTGATATGAAAGATGTGAAAACAAACAAAAACAA
ATCCTTCGGTTTACTTGGCATGAAAGAACGCGTAGACTTACTGGAAGGTAAAATGACCATAGACTCAAAAATAGGTCTAG
GGACATTCATCATGATTCGCGTGCCACTAACATTGCAAAATAAAATTGTAAAATAG

Domains

Predicted by InterproScan.

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	85.455	98.465	0.841