Detailed information    

insolico Bioinformatically predicted

Overview


Name   comQ   Type   Regulator
Locus tag   I653_RS15150 Genome accession   NC_020832
Coordinates   3031211..3032071 (-) Length   286 a.a.
NCBI ID   WP_015483633.1    Uniprot ID   -
Organism   Bacillus subtilis subsp. subtilis str. BAB-1     
Function   modification of ComX; production of ComX (predicted from homology)   
Competence regulation

Genomic Context


Location: 3026211..3037071
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I653_RS15115 (I653_15235) mrpE 3026442..3026918 (+) 477 WP_003228815.1 Na+/H+ antiporter subunit E -
  I653_RS15120 (I653_15240) mrpF 3026918..3027202 (+) 285 WP_003228814.1 Na(+)/H(+) antiporter subunit F1 -
  I653_RS15125 (I653_15245) mnhG 3027186..3027560 (+) 375 WP_014477830.1 monovalent cation/H(+) antiporter subunit G -
  I653_RS15130 (I653_15250) yuxO 3027599..3027979 (-) 381 WP_015483631.1 hotdog fold thioesterase -
  I653_RS15135 (I653_15255) comA 3027997..3028641 (-) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  I653_RS15140 (I653_15260) comP 3028722..3031022 (-) 2301 WP_015483632.1 histidine kinase Regulator
  I653_RS15145 (I653_15265) comX 3031034..3031198 (-) 165 WP_015384519.1 competence pheromone ComX -
  I653_RS15150 (I653_15270) comQ 3031211..3032071 (-) 861 WP_015483633.1 polyprenyl synthetase family protein Regulator
  I653_RS15155 (I653_15275) degQ 3032256..3032396 (-) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  I653_RS21505 - 3032618..3032680 (+) 63 Protein_3039 hypothetical protein -
  I653_RS15160 (I653_15280) - 3032858..3033226 (+) 369 WP_015483634.1 hypothetical protein -
  I653_RS15165 (I653_15285) pdeH 3033202..3034431 (-) 1230 WP_003243525.1 cyclic di-GMP phosphodiesterase -
  I653_RS15170 (I653_15290) pncB 3034568..3036040 (-) 1473 WP_003228788.1 nicotinate phosphoribosyltransferase -
  I653_RS15175 (I653_15295) pncA 3036056..3036607 (-) 552 WP_014477836.1 isochorismatase family cysteine hydrolase -

Sequence


Protein


Download         Length: 286 a.a.        Molecular weight: 32511.47 Da        Isoelectric Point: 4.7414

>NTDB_id=47521 I653_RS15150 WP_015483633.1 3031211..3032071(-) (comQ) [Bacillus subtilis subsp. subtilis str. BAB-1]
MKEIVSQKIMNQDLERYLQNFIESKDTFEFADLALHHYLAFNGQDQKAIELLAAGIELLILSFDIYDDLEDQDNGSAVWM
KIDSSIALNAVTALYTLSIQVMCQASHEPEFTQEILNFALQSIQGQHDDIVNAPQTEEACLEMIKNKSGALTALPCVMGV
MLATGKYHPIVASYSYELGIIAQIENDYQGLYYLNNDFIQKKNTLAYLYLNKRFNAASAEILSWYENAELFLSLNPKQIK
EKLTEAGVVQYLLVMKHLSLQKLKKEIARLELQENKIKKLITGIIK

Nucleotide


Download         Length: 861 bp        

>NTDB_id=47521 I653_RS15150 WP_015483633.1 3031211..3032071(-) (comQ) [Bacillus subtilis subsp. subtilis str. BAB-1]
ATGAAGGAGATTGTAAGCCAAAAAATAATGAATCAGGACTTGGAACGATATCTTCAGAATTTTATTGAGTCTAAGGATAC
GTTTGAGTTTGCCGATTTGGCTCTTCATCATTATTTAGCTTTTAACGGTCAGGACCAAAAAGCAATCGAATTGCTAGCTG
CCGGAATTGAATTGCTTATACTCTCATTCGATATTTATGATGACTTAGAGGATCAAGATAATGGAAGTGCTGTCTGGATG
AAGATTGACTCGTCAATCGCTTTAAATGCAGTTACAGCTCTTTACACCCTAAGTATACAAGTGATGTGTCAAGCTAGTCA
TGAACCAGAATTTACACAAGAGATATTGAATTTTGCGTTACAATCAATTCAAGGCCAGCATGATGATATTGTGAATGCGC
CGCAAACTGAAGAAGCCTGTCTTGAAATGATCAAAAATAAATCAGGAGCGCTAACGGCATTGCCCTGTGTAATGGGAGTA
ATGTTGGCAACAGGCAAATACCATCCCATTGTAGCTTCTTATTCTTATGAACTTGGGATTATTGCACAAATCGAAAATGA
TTACCAAGGTTTATATTATTTAAATAACGATTTTATTCAGAAGAAAAACACATTGGCATACTTATACTTAAATAAACGTT
TTAATGCAGCTTCTGCAGAAATCTTGAGTTGGTATGAAAATGCTGAGTTGTTCTTATCATTGAATCCCAAACAAATAAAA
GAAAAATTAACTGAGGCAGGCGTAGTGCAATATTTACTTGTAATGAAACACTTGTCATTACAAAAACTAAAGAAAGAAAT
TGCTAGATTAGAATTGCAAGAGAATAAAATAAAAAAATTAATAACAGGAATCATAAAATAA

Domains


Predicted by InterProScan.

(39-194)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comQ Bacillus subtilis subsp. subtilis str. 168

45.423

99.301

0.451


Multiple sequence alignment