Detailed information NTG0475105

Bioinformatically predicted

Overview

• Name: comGA
• Type: Machinery gene
• Locus tag: DMSX03_RS06470
• Genome accession: NZ_CP060271
• Coordinates: 1374048..1375022 (+)
• Length: 324 a.a.
• NCBI ID: WP_029377190.1
• Uniprot ID: -
• Organism: Staphylococcus xylosus strain DMSX03
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1369048..1380022

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DMSX03_RS06435	rpmG	1369161..1369310 (+)	150	WP_002483181.1	50S ribosomal protein L33	-
DMSX03_RS06440	-	1369441..1369983 (+)	543	WP_029377184.1	5-formyltetrahydrofolate cyclo-ligase	-
DMSX03_RS06445	-	1369995..1371452 (+)	1458	WP_029377185.1	rhomboid family intramembrane serine protease	-
DMSX03_RS06450	-	1371436..1371633 (+)	198	WP_029377186.1	YqgQ family protein	-
DMSX03_RS06455	-	1372015..1373001 (+)	987	WP_029377187.1	glucokinase	-
DMSX03_RS06460	-	1373001..1373324 (+)	324	WP_029377188.1	MTH1187 family thiamine-binding protein	-
DMSX03_RS06465	-	1373326..1373949 (+)	624	WP_029377189.1	MBL fold metallo-hydrolase	-
DMSX03_RS06470	comGA	1374048..1375022 (+)	975	WP_029377190.1	competence type IV pilus ATPase ComGA	Machinery gene
DMSX03_RS06475	comGB	1374994..1376061 (+)	1068	WP_051664335.1	competence type IV pilus assembly protein ComGB	-
DMSX03_RS06480	comGC	1376081..1376398 (+)	318	WP_029377192.1	competence type IV pilus major pilin ComGC	Machinery gene
DMSX03_RS06485	comGD	1376373..1376822 (+)	450	WP_257470552.1	competence type IV pilus minor pilin ComGD	-
DMSX03_RS06490	-	1376809..1377108 (+)	300	WP_029377194.1	hypothetical protein	-
DMSX03_RS06495	comGF	1377092..1377523 (+)	432	WP_231291662.1	competence type IV pilus minor pilin ComGF	-
DMSX03_RS06500	-	1377703..1378203 (+)	501	WP_037557022.1	shikimate kinase	-
DMSX03_RS06505	gcvT	1378390..1379481 (+)	1092	WP_029377198.1	glycine cleavage system aminomethyltransferase GcvT	-

Sequence

Protein

• Length: 324 a.a.
• Molecular weight: 37138.33 Da
• Isoelectric Point: 9.3719

>NTDB_id=475105 DMSX03_RS06470 WP_029377190.1 1374048..1375022(+) (comGA) [Staphylococcus xylosus strain DMSX03]
MKLLFNSMIEKAISNDASDIHFIPADKEVMIKFRIRDDLKSIETLQLNTYLKLLTYMKYQAGLDVSKHNAAQSGRYIYKL
KQIYFLRISTLPLSLGNESCVIRIIPQYFQKHKNNQNITHLYNLMNKKQGLILLSGPTGSGKSTLMYHMLSYAKENLNLN
IITIEEPVEQLINGITQISLNEKAGINYETSFKAILRCDPDIILIGEIRDANVAKHVIQASLSGHLVLSTIHASNCKGVI
LRLLEMGITVQQLIQSITSILNQRLITNVKGERELVYEQITKEDVYHFFKNSYTLPKEFHNLSYKLNKMSKEGMICETSM
ERYL

Nucleotide

• Length: 975 bp

>NTDB_id=475105 DMSX03_RS06470 WP_029377190.1 1374048..1375022(+) (comGA) [Staphylococcus xylosus strain DMSX03]
TTGAAGCTATTGTTTAATAGTATGATTGAAAAGGCAATTAGTAATGATGCATCAGATATTCATTTTATCCCCGCTGATAA
AGAAGTAATGATTAAATTTAGAATACGTGATGATTTGAAGTCTATAGAAACATTGCAATTAAATACGTATTTAAAATTAT
TAACCTATATGAAATACCAAGCTGGATTAGATGTCTCTAAACATAATGCTGCACAGAGTGGTAGATATATTTATAAATTA
AAACAAATTTACTTCCTTAGAATATCAACGCTTCCTTTATCACTAGGAAATGAAAGCTGTGTTATTAGGATTATTCCGCA
ATATTTTCAAAAGCATAAAAATAATCAGAACATAACGCATTTATATAATCTAATGAATAAAAAACAAGGATTAATTTTAT
TAAGTGGACCTACTGGCTCTGGAAAAAGTACGTTAATGTATCACATGTTATCTTATGCTAAAGAGAACTTAAATTTAAAT
ATAATTACAATTGAAGAACCCGTTGAACAATTAATAAATGGCATAACTCAAATATCTTTAAATGAAAAGGCAGGGATAAA
TTATGAAACTTCTTTTAAAGCTATTTTACGCTGCGATCCAGATATTATCTTGATCGGAGAAATAAGAGATGCAAACGTAG
CTAAACATGTCATACAAGCCAGTTTAAGTGGTCATTTAGTACTTTCGACAATTCATGCTAGTAATTGCAAAGGAGTTATT
TTAAGACTGCTAGAAATGGGGATAACGGTTCAACAACTCATACAATCAATCACTAGCATATTAAATCAAAGGCTTATTAC
TAACGTAAAAGGTGAAAGAGAGCTTGTATATGAACAGATAACTAAAGAAGATGTTTATCACTTCTTTAAAAATAGCTATA
CATTACCCAAAGAATTTCATAACTTATCTTATAAACTAAATAAAATGTCAAAAGAGGGGATGATATGTGAAACATCAATG
GAACGTTATCTCTAA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (7-267)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGA	Staphylococcus aureus MW2	62.654	100	0.627
comGA	Staphylococcus aureus N315	62.654	100	0.627