Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   I6A80_RS27040 Genome accession   NZ_CP060241
Coordinates   5861122..5861529 (-) Length   135 a.a.
NCBI ID   WP_003084583.1    Uniprot ID   A0A0H2ZL28
Organism   Pseudomonas aeruginosa strain C-I-1     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 5856122..5866529
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6A80_RS27020 (I6A80_005541) pilK 5857054..5857929 (-) 876 WP_003100938.1 type 4 fimbrial methyltransferase PilK -
  I6A80_RS27025 (I6A80_005542) pilJ 5857990..5860038 (-) 2049 WP_003100940.1 chemotaxis chemoreceptor PilJ -
  I6A80_RS27030 (I6A80_005543) - 5860123..5860659 (-) 537 WP_033956703.1 chemotaxis protein CheW -
  I6A80_RS27035 (I6A80_005544) pilH 5860710..5861075 (-) 366 WP_003084587.1 twitching motility response regulator PilH -
  I6A80_RS27040 (I6A80_005545) pilG 5861122..5861529 (-) 408 WP_003084583.1 twitching motility response regulator PilG Regulator
  I6A80_RS27045 (I6A80_005546) gshB 5861784..5862737 (+) 954 WP_003100943.1 glutathione synthase -
  I6A80_RS27050 (I6A80_005547) - 5862884..5863777 (+) 894 WP_003162015.1 energy transducer TonB -
  I6A80_RS27055 (I6A80_005548) - 5863826..5864395 (+) 570 WP_033956709.1 YqgE/AlgH family protein -
  I6A80_RS27060 (I6A80_005549) ruvX 5864395..5864829 (+) 435 WP_003084575.1 Holliday junction resolvase RuvX -
  I6A80_RS27065 (I6A80_005550) pyrR 5864941..5865453 (+) 513 WP_003084574.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  I6A80_RS27070 (I6A80_005551) - 5865477..5866481 (+) 1005 WP_003084569.1 aspartate carbamoyltransferase catalytic subunit -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14718.11 Da        Isoelectric Point: 7.1340

>NTDB_id=474647 I6A80_RS27040 WP_003084583.1 5861122..5861529(-) (pilG) [Pseudomonas aeruginosa strain C-I-1]
MEQQSDGLKVMVIDDSKTIRRTAETLLKKVGCDVITAIDGFDALAKIADTHPNIIFVDIMMPRLDGYQTCALIKNNSAFK
STPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKEELLGAIKAHVPSFTPVDAVS

Nucleotide


Download         Length: 408 bp        

>NTDB_id=474647 I6A80_RS27040 WP_003084583.1 5861122..5861529(-) (pilG) [Pseudomonas aeruginosa strain C-I-1]
ATGGAACAGCAATCCGACGGTTTGAAAGTGATGGTGATCGACGATTCGAAAACGATTCGTCGCACCGCCGAAACACTGCT
GAAAAAGGTCGGTTGCGACGTGATCACGGCAATCGACGGCTTCGATGCCCTGGCGAAGATCGCCGATACCCATCCGAACA
TCATTTTCGTCGACATCATGATGCCGCGCCTGGATGGCTATCAGACCTGCGCCCTGATCAAGAACAACAGCGCGTTCAAG
TCCACCCCGGTGATCATGCTGTCCTCCAAGGACGGCCTGTTCGACAAGGCCAAGGGGCGCATCGTCGGCTCCGACCAGTA
CCTCACCAAGCCGTTCAGCAAGGAAGAGCTGCTGGGCGCGATCAAGGCACACGTACCCAGCTTCACCCCGGTGGACGCCG
TTTCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H2ZL28

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.803

94.074

0.704
  vicR Streptococcus mutans UA159

44.444

86.667

0.385