Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | H7F27_RS20355 | Genome accession | NZ_CP060193 |
| Coordinates | 4036427..4038859 (-) | Length | 810 a.a. |
| NCBI ID | WP_010332750.1 | Uniprot ID | A0A9Q6A5H8 |
| Organism | Bacillus sp. PAMC26543 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 4031427..4043859
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H7F27_RS20330 (H7F27_20330) | ispF | 4031471..4031947 (-) | 477 | WP_103672508.1 | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase | - |
| H7F27_RS20335 (H7F27_20335) | ispD | 4031940..4032638 (-) | 699 | WP_185848355.1 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase | - |
| H7F27_RS20340 (H7F27_20340) | - | 4032653..4033753 (-) | 1101 | WP_059291688.1 | PIN/TRAM domain-containing protein | - |
| H7F27_RS20345 (H7F27_20345) | disA | 4033873..4034955 (-) | 1083 | WP_003242042.1 | DNA integrity scanning diadenylate cyclase DisA | - |
| H7F27_RS20350 (H7F27_20350) | radA | 4034959..4036335 (-) | 1377 | WP_044153447.1 | DNA repair protein RadA | Machinery gene |
| H7F27_RS20355 (H7F27_20355) | clpC | 4036427..4038859 (-) | 2433 | WP_010332750.1 | ATP-dependent protease ATP-binding subunit ClpC | Regulator |
| H7F27_RS20360 (H7F27_20360) | - | 4038856..4039947 (-) | 1092 | WP_059291687.1 | protein arginine kinase | - |
| H7F27_RS20365 (H7F27_20365) | - | 4039947..4040504 (-) | 558 | WP_095714843.1 | UvrB/UvrC motif-containing protein | - |
| H7F27_RS20370 (H7F27_20370) | ctsR | 4040518..4040982 (-) | 465 | WP_010332747.1 | transcriptional regulator CtsR | - |
Sequence
Protein
Download Length: 810 a.a. Molecular weight: 90054.61 Da Isoelectric Point: 6.1838
>NTDB_id=474544 H7F27_RS20355 WP_010332750.1 4036427..4038859(-) (clpC) [Bacillus sp. PAMC26543]
MMFGRFTERAQKVLALAQEEALRLGHNNIGTEHILLGLVREGEGIAAKALQALGLGSDKIQKEVESLIGRGQEMSQTIHY
TPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNETGSSAAGTNSNANT
PTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIINNEVPEILRDKRVM
TLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEY
RKYIEKDAALERRFQPIQVDQPSVDESIQILKGLRDRYEAHHRVSITDEAIEAAVKLSDRYISDRFLPDKAIDLIDEAGS
KVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTEQRLREQVEDTKKSWKEKQGQENSEVSVDDIAMVV
SSWTGVPVSKIAQTETDKLLNMESILHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAE
SIFGDEEAMIRIDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRLT
DSKGRTVDFRNTILIMTSNVGASELKRNKYVGFNVQDETQNHKDMKDKVMGELKRAFRPEFINRIDEIIVFHSLEKKHLA
EIVSLMSDQLTKRLKEQDLSIELTEAAKAKVAEEGVDLEYGARPLRRAIQKHVEDRLSEELLRGNIHKGHHIVLDVEDGE
FVVKTTAKTN
MMFGRFTERAQKVLALAQEEALRLGHNNIGTEHILLGLVREGEGIAAKALQALGLGSDKIQKEVESLIGRGQEMSQTIHY
TPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNETGSSAAGTNSNANT
PTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIINNEVPEILRDKRVM
TLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEY
RKYIEKDAALERRFQPIQVDQPSVDESIQILKGLRDRYEAHHRVSITDEAIEAAVKLSDRYISDRFLPDKAIDLIDEAGS
KVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTEQRLREQVEDTKKSWKEKQGQENSEVSVDDIAMVV
SSWTGVPVSKIAQTETDKLLNMESILHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAE
SIFGDEEAMIRIDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRLT
DSKGRTVDFRNTILIMTSNVGASELKRNKYVGFNVQDETQNHKDMKDKVMGELKRAFRPEFINRIDEIIVFHSLEKKHLA
EIVSLMSDQLTKRLKEQDLSIELTEAAKAKVAEEGVDLEYGARPLRRAIQKHVEDRLSEELLRGNIHKGHHIVLDVEDGE
FVVKTTAKTN
Nucleotide
Download Length: 2433 bp
>NTDB_id=474544 H7F27_RS20355 WP_010332750.1 4036427..4038859(-) (clpC) [Bacillus sp. PAMC26543]
ATGATGTTTGGAAGATTTACAGAACGAGCTCAAAAGGTACTGGCGCTTGCACAGGAAGAAGCACTTCGTTTAGGCCATAA
TAATATCGGCACTGAGCATATTTTATTAGGACTGGTGCGAGAAGGAGAAGGCATCGCTGCTAAAGCACTTCAAGCGCTTG
GACTTGGTTCAGATAAAATCCAAAAAGAAGTTGAGAGCTTAATTGGGCGCGGACAGGAAATGTCTCAAACGATTCATTAT
ACTCCGAGAGCTAAAAAAGTCATTGAGCTATCAATGGATGAGGCCAGAAAACTCGGCCATTCTTATGTGGGAACAGAGCA
TATTCTTCTTGGACTTATTCGCGAAGGTGAAGGTGTGGCTGCGAGAGTGCTTAACAATCTCGGAGTCAGCTTAAATAAAG
CAAGACAGCAAGTGCTTCAGCTTCTTGGAAGTAATGAAACAGGTTCATCAGCGGCTGGAACAAACAGCAATGCGAATACG
CCTACACTAGATAGCCTGGCAAGAGATTTAACAGCGATTGCGAAGGAAGACAGCCTTGATCCGGTTATCGGCAGAAGCAA
AGAAATTCAGCGTGTCATTGAAGTGCTGAGCCGCAGAACGAAAAACAATCCTGTTCTGATTGGGGAACCGGGCGTAGGGA
AAACGGCTATCGCAGAAGGTCTTGCACAGCAAATTATCAATAATGAAGTTCCCGAAATTTTACGGGATAAACGCGTTATG
ACATTAGACATGGGAACAGTTGTTGCCGGTACGAAATATCGCGGTGAATTTGAGGACCGCTTGAAAAAAGTGATGGATGA
AATCCGTCAGGCAGGAAATATCATTCTATTCATTGATGAGCTCCATACACTAATCGGAGCGGGCGGAGCAGAAGGTGCCA
TTGATGCATCCAACATTTTGAAACCTTCACTTGCTCGCGGAGAACTTCAGTGCATTGGTGCGACAACTCTTGATGAGTAC
CGTAAATATATTGAAAAAGATGCAGCTCTGGAACGCCGTTTTCAGCCAATCCAGGTTGATCAGCCGTCTGTAGACGAAAG
CATTCAAATCCTAAAAGGCTTGCGTGACCGATATGAAGCCCACCACCGCGTTTCTATCACTGATGAAGCCATTGAGGCTG
CGGTTAAGCTTTCTGACAGATATATCTCTGACCGTTTCCTTCCGGATAAAGCTATTGACTTGATCGATGAAGCGGGTTCA
AAGGTCAGATTGCGTTCCTTTACAACGCCTCCTAATTTAAAAGAGCTTGAACAGAAACTTGATGAAGTTCGTAAAGAGAA
GGATGCTGCGGTGCAAAGCCAAGAGTTTGAAAAAGCGGCTTCCTTGCGTGATACGGAACAGCGTTTGCGTGAACAAGTGG
AAGATACGAAAAAATCATGGAAAGAGAAGCAGGGACAGGAAAACTCAGAGGTTTCTGTGGATGATATTGCGATGGTTGTA
TCCAGCTGGACTGGGGTGCCTGTATCAAAAATCGCTCAAACTGAAACTGATAAGCTTCTTAATATGGAGAGCATTCTTCA
TTCCCGTGTCATCGGCCAAGATGAAGCTGTTGTAGCCGTTGCTAAAGCGGTCAGACGTGCAAGAGCAGGGCTAAAAGACC
CTAAACGCCCAATCGGCTCATTCATTTTCTTAGGCCCTACAGGTGTAGGTAAAACGGAGCTTGCACGGGCACTTGCTGAG
TCTATCTTCGGTGATGAAGAAGCCATGATCAGAATTGATATGTCTGAATACATGGAAAAACACTCGACTTCTAGACTTGT
AGGTTCACCTCCAGGGTATGTGGGATACGATGAGGGCGGCCAATTAACAGAGAAGGTAAGAAGAAAACCATACTCTGTTG
TGCTTCTTGATGAGATTGAGAAAGCGCACCCTGACGTCTTCAATATCCTCCTTCAAGTACTTGAGGACGGACGATTGACT
GATTCTAAAGGCCGTACAGTTGATTTCCGCAACACGATTCTGATCATGACGTCAAACGTCGGAGCAAGTGAGCTGAAACG
CAACAAATATGTCGGCTTCAACGTTCAGGATGAGACGCAAAATCATAAAGACATGAAGGATAAAGTGATGGGTGAGCTGA
AACGTGCGTTCAGACCGGAATTCATCAACCGTATTGATGAAATTATCGTCTTCCATTCACTCGAGAAAAAACATCTGGCT
GAAATCGTGTCATTGATGTCTGATCAATTAACGAAACGTCTTAAAGAACAGGATCTTTCTATTGAATTGACGGAAGCTGC
GAAAGCAAAAGTCGCAGAAGAGGGCGTGGACCTTGAATATGGTGCCCGCCCGCTCAGAAGAGCCATTCAAAAACATGTGG
AGGATCGTTTATCTGAAGAGCTGCTCAGAGGTAACATTCATAAAGGACACCATATCGTTCTTGATGTAGAAGATGGCGAA
TTTGTCGTAAAAACGACTGCTAAAACGAATTAA
ATGATGTTTGGAAGATTTACAGAACGAGCTCAAAAGGTACTGGCGCTTGCACAGGAAGAAGCACTTCGTTTAGGCCATAA
TAATATCGGCACTGAGCATATTTTATTAGGACTGGTGCGAGAAGGAGAAGGCATCGCTGCTAAAGCACTTCAAGCGCTTG
GACTTGGTTCAGATAAAATCCAAAAAGAAGTTGAGAGCTTAATTGGGCGCGGACAGGAAATGTCTCAAACGATTCATTAT
ACTCCGAGAGCTAAAAAAGTCATTGAGCTATCAATGGATGAGGCCAGAAAACTCGGCCATTCTTATGTGGGAACAGAGCA
TATTCTTCTTGGACTTATTCGCGAAGGTGAAGGTGTGGCTGCGAGAGTGCTTAACAATCTCGGAGTCAGCTTAAATAAAG
CAAGACAGCAAGTGCTTCAGCTTCTTGGAAGTAATGAAACAGGTTCATCAGCGGCTGGAACAAACAGCAATGCGAATACG
CCTACACTAGATAGCCTGGCAAGAGATTTAACAGCGATTGCGAAGGAAGACAGCCTTGATCCGGTTATCGGCAGAAGCAA
AGAAATTCAGCGTGTCATTGAAGTGCTGAGCCGCAGAACGAAAAACAATCCTGTTCTGATTGGGGAACCGGGCGTAGGGA
AAACGGCTATCGCAGAAGGTCTTGCACAGCAAATTATCAATAATGAAGTTCCCGAAATTTTACGGGATAAACGCGTTATG
ACATTAGACATGGGAACAGTTGTTGCCGGTACGAAATATCGCGGTGAATTTGAGGACCGCTTGAAAAAAGTGATGGATGA
AATCCGTCAGGCAGGAAATATCATTCTATTCATTGATGAGCTCCATACACTAATCGGAGCGGGCGGAGCAGAAGGTGCCA
TTGATGCATCCAACATTTTGAAACCTTCACTTGCTCGCGGAGAACTTCAGTGCATTGGTGCGACAACTCTTGATGAGTAC
CGTAAATATATTGAAAAAGATGCAGCTCTGGAACGCCGTTTTCAGCCAATCCAGGTTGATCAGCCGTCTGTAGACGAAAG
CATTCAAATCCTAAAAGGCTTGCGTGACCGATATGAAGCCCACCACCGCGTTTCTATCACTGATGAAGCCATTGAGGCTG
CGGTTAAGCTTTCTGACAGATATATCTCTGACCGTTTCCTTCCGGATAAAGCTATTGACTTGATCGATGAAGCGGGTTCA
AAGGTCAGATTGCGTTCCTTTACAACGCCTCCTAATTTAAAAGAGCTTGAACAGAAACTTGATGAAGTTCGTAAAGAGAA
GGATGCTGCGGTGCAAAGCCAAGAGTTTGAAAAAGCGGCTTCCTTGCGTGATACGGAACAGCGTTTGCGTGAACAAGTGG
AAGATACGAAAAAATCATGGAAAGAGAAGCAGGGACAGGAAAACTCAGAGGTTTCTGTGGATGATATTGCGATGGTTGTA
TCCAGCTGGACTGGGGTGCCTGTATCAAAAATCGCTCAAACTGAAACTGATAAGCTTCTTAATATGGAGAGCATTCTTCA
TTCCCGTGTCATCGGCCAAGATGAAGCTGTTGTAGCCGTTGCTAAAGCGGTCAGACGTGCAAGAGCAGGGCTAAAAGACC
CTAAACGCCCAATCGGCTCATTCATTTTCTTAGGCCCTACAGGTGTAGGTAAAACGGAGCTTGCACGGGCACTTGCTGAG
TCTATCTTCGGTGATGAAGAAGCCATGATCAGAATTGATATGTCTGAATACATGGAAAAACACTCGACTTCTAGACTTGT
AGGTTCACCTCCAGGGTATGTGGGATACGATGAGGGCGGCCAATTAACAGAGAAGGTAAGAAGAAAACCATACTCTGTTG
TGCTTCTTGATGAGATTGAGAAAGCGCACCCTGACGTCTTCAATATCCTCCTTCAAGTACTTGAGGACGGACGATTGACT
GATTCTAAAGGCCGTACAGTTGATTTCCGCAACACGATTCTGATCATGACGTCAAACGTCGGAGCAAGTGAGCTGAAACG
CAACAAATATGTCGGCTTCAACGTTCAGGATGAGACGCAAAATCATAAAGACATGAAGGATAAAGTGATGGGTGAGCTGA
AACGTGCGTTCAGACCGGAATTCATCAACCGTATTGATGAAATTATCGTCTTCCATTCACTCGAGAAAAAACATCTGGCT
GAAATCGTGTCATTGATGTCTGATCAATTAACGAAACGTCTTAAAGAACAGGATCTTTCTATTGAATTGACGGAAGCTGC
GAAAGCAAAAGTCGCAGAAGAGGGCGTGGACCTTGAATATGGTGCCCGCCCGCTCAGAAGAGCCATTCAAAAACATGTGG
AGGATCGTTTATCTGAAGAGCTGCTCAGAGGTAACATTCATAAAGGACACCATATCGTTCTTGATGTAGAAGATGGCGAA
TTTGTCGTAAAAACGACTGCTAAAACGAATTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
98.889 |
100 |
0.989 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
50.249 |
99.012 |
0.498 |
| clpC | Streptococcus thermophilus LMD-9 |
46.489 |
100 |
0.474 |
| clpC | Streptococcus thermophilus LMG 18311 |
46.247 |
100 |
0.472 |
| clpC | Streptococcus pneumoniae Rx1 |
45.365 |
99.877 |
0.453 |
| clpC | Streptococcus pneumoniae D39 |
45.365 |
99.877 |
0.453 |
| clpC | Streptococcus pneumoniae TIGR4 |
45.241 |
99.877 |
0.452 |
| clpC | Streptococcus mutans UA159 |
43.462 |
100 |
0.443 |
| clpE | Streptococcus mutans UA159 |
53.159 |
80.123 |
0.426 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
48.523 |
87.778 |
0.426 |
| clpE | Streptococcus pneumoniae TIGR4 |
53.772 |
76.914 |
0.414 |
| clpE | Streptococcus pneumoniae Rx1 |
53.772 |
76.914 |
0.414 |
| clpE | Streptococcus pneumoniae D39 |
53.772 |
76.914 |
0.414 |
| clpE | Streptococcus pneumoniae R6 |
53.772 |
76.914 |
0.414 |