Detailed information    

insolico Bioinformatically predicted

Overview

Name   nin/comJ   Type   Regulator
Locus tag   H7F27_RS18995 Genome accession   NZ_CP060193
Coordinates   3771476..3771874 (+) Length   132 a.a.
NCBI ID   WP_024120177.1    Uniprot ID   A0A7G7UCH7
Organism   Bacillus sp. PAMC26543     
Function   represses the expression of nucA (predicted from homology)   
Competence regulation

Genomic Context

Location: 3766476..3776874
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H7F27_RS18970 (H7F27_18970) hxlR 3767201..3767563 (-) 363 WP_003241118.1 transcriptional activator HxlR -
  H7F27_RS18975 (H7F27_18975) hxlA 3767795..3768427 (+) 633 WP_003224929.1 3-hexulose-6-phosphate synthase -
  H7F27_RS18980 (H7F27_18980) hxlB 3768433..3768990 (+) 558 WP_185848295.1 6-phospho-3-hexuloisomerase -
  H7F27_RS18985 (H7F27_18985) tlpC 3769103..3770827 (+) 1725 WP_185848296.1 methyl-accepting chemotaxis protein TlpC -
  H7F27_RS18990 (H7F27_18990) nucA/comI 3771012..3771449 (+) 438 WP_024120178.1 DNA-entry nuclease Machinery gene
  H7F27_RS18995 (H7F27_18995) nin/comJ 3771476..3771874 (+) 399 WP_024120177.1 competence protein ComJ Regulator
  H7F27_RS19000 (H7F27_19000) - 3771910..3773343 (-) 1434 WP_095714429.1 glycoside hydrolase family 1 protein -
  H7F27_RS19005 (H7F27_19005) - 3773416..3774144 (-) 729 WP_024120175.1 AAA family ATPase -
  H7F27_RS19010 (H7F27_19010) - 3774296..3774631 (-) 336 WP_185848297.1 YckD family protein -
  H7F27_RS19015 (H7F27_19015) - 3774713..3775168 (-) 456 WP_185848298.1 RDD family protein -
  H7F27_RS19020 (H7F27_19020) - 3775181..3776317 (-) 1137 WP_185848299.1 zinc-dependent alcohol dehydrogenase -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 14945.86 Da        Isoelectric Point: 4.5022

>NTDB_id=474541 H7F27_RS18995 WP_024120177.1 3771476..3771874(+) (nin/comJ) [Bacillus sp. PAMC26543]
MIKSWKPQELTISYHQFTVFQKGSAPPVIDWTDEAIEKGYAEADEAISFEAQRNSKVYILLRLNSSETVASYEKKVTVPF
HVTTDGIEIESIMSKRLSFDLPKGDYQFTCYTVPAELSDLHADTYIIDAVSV

Nucleotide


Download         Length: 399 bp        

>NTDB_id=474541 H7F27_RS18995 WP_024120177.1 3771476..3771874(+) (nin/comJ) [Bacillus sp. PAMC26543]
TTGATCAAATCATGGAAGCCGCAAGAACTGACGATTTCATATCATCAATTTACTGTATTTCAAAAGGGTTCCGCACCGCC
TGTCATCGATTGGACAGATGAAGCGATTGAAAAAGGATATGCGGAAGCGGACGAAGCCATTTCGTTTGAGGCACAGCGAA
ATTCAAAGGTATATATTCTTTTACGCCTTAACAGTTCAGAAACAGTTGCATCCTATGAAAAAAAAGTGACTGTTCCTTTT
CACGTCACAACAGACGGAATTGAAATTGAAAGCATCATGTCCAAGAGGCTGTCCTTTGACCTTCCTAAAGGAGACTATCA
ATTCACATGCTACACTGTGCCGGCTGAGCTGTCAGATCTGCACGCTGACACTTATATCATTGATGCTGTTTCCGTCTAA

Domains

Predicted by InterproScan.

Competence protein J (ComJ) (ComJ)

(9-129)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7G7UCH7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nin/comJ Bacillus subtilis subsp. subtilis str. 168

87.121

100

0.871