Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   JRY11_RS01320 Genome accession   NZ_CP070382
Coordinates   244617..245399 (-) Length   260 a.a.
NCBI ID   WP_023188991.1    Uniprot ID   -
Organism   Lactococcus lactis strain KF140     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 239617..250399
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JRY11_RS01290 (JRY11_000260) - 239923..240912 (-) 990 WP_021721904.1 mevalonate kinase -
  JRY11_RS01295 (JRY11_000261) mvaD 240899..241855 (-) 957 WP_023188990.1 diphosphomevalonate decarboxylase -
  JRY11_RS01300 (JRY11_000262) mvk 242160..243092 (+) 933 WP_003131564.1 mevalonate kinase -
  JRY11_RS01305 (JRY11_000263) - 243155..243346 (+) 192 WP_012897234.1 hypothetical protein -
  JRY11_RS01310 (JRY11_000264) rsmI 243423..244298 (-) 876 WP_003131568.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  JRY11_RS01315 (JRY11_000265) yabA 244298..244624 (-) 327 WP_011675472.1 DNA replication initiation control protein YabA -
  JRY11_RS01320 (JRY11_000266) yaaT 244617..245399 (-) 783 WP_023188991.1 stage 0 sporulation family protein Regulator
  JRY11_RS01325 (JRY11_000267) - 245451..246311 (-) 861 WP_012897231.1 DNA polymerase III subunit delta' -
  JRY11_RS01330 (JRY11_000268) tmk 246444..247079 (-) 636 WP_012897230.1 dTMP kinase -
  JRY11_RS01335 (JRY11_000269) yycF 247257..247958 (+) 702 WP_003131580.1 response regulator YycF -
  JRY11_RS01340 (JRY11_000270) vicK 247951..249393 (+) 1443 WP_012897229.1 cell wall metabolism sensor histidine kinase WalK Regulator
  JRY11_RS01345 (JRY11_000271) vicX 249562..250374 (+) 813 WP_003131583.1 MBL fold metallo-hydrolase Regulator

Sequence

Protein


Download         Length: 260 a.a.        Molecular weight: 29817.30 Da        Isoelectric Point: 6.0566

>NTDB_id=474106 JRY11_RS01320 WP_023188991.1 244617..245399(-) (yaaT) [Lactococcus lactis strain KF140]
MIYEIKFAHGESNVFAISDIELAPQTEVILRSDKGNFYGKIVREISEEANLEIHHTIVREVNEDDLQVIAKLEERSKQAK
DKVRQLIIEQGLEMKIIDVAYNFDQMQLFISFTAENRVDFRLLLRELATTFRIRIELRQIGPRDAAKIHGGLGPCGRPLC
CSEFVYEFPNVSIKMAKNQNLSLKQNKLNGLCGRLMCCLTYEDSFYKEAQQLFPDFGEFVTTSEGKGKVVGLNVLKNRVK
IRFGEYSKDFELAEIEVNHG

Nucleotide


Download         Length: 783 bp        

>NTDB_id=474106 JRY11_RS01320 WP_023188991.1 244617..245399(-) (yaaT) [Lactococcus lactis strain KF140]
ATGATTTATGAAATAAAATTTGCACATGGCGAATCAAATGTATTTGCAATAAGTGATATAGAACTTGCTCCACAAACAGA
AGTTATCCTTCGTTCAGATAAGGGAAACTTTTACGGAAAAATTGTACGTGAAATTTCTGAAGAAGCTAATCTTGAAATTC
ACCACACGATTGTGCGTGAAGTAAATGAGGATGATCTCCAAGTTATTGCAAAACTTGAAGAACGTTCTAAACAAGCCAAA
GATAAAGTTCGCCAACTTATCATCGAACAAGGTTTGGAAATGAAAATTATTGATGTTGCTTATAATTTCGACCAAATGCA
ACTTTTTATTTCGTTTACAGCAGAGAATCGTGTTGATTTTCGATTGCTTTTGCGTGAGTTGGCAACAACTTTTAGAATTA
GGATTGAACTTCGCCAAATTGGGCCAAGAGATGCGGCTAAAATTCATGGTGGACTTGGACCTTGTGGACGTCCTTTGTGC
TGTTCTGAGTTTGTTTATGAATTTCCAAATGTTTCAATCAAAATGGCCAAAAATCAAAATCTATCTTTGAAACAAAATAA
ATTGAACGGTCTTTGCGGTCGTTTGATGTGCTGTTTAACTTATGAAGATAGTTTTTATAAAGAAGCCCAACAACTTTTCC
CAGATTTTGGTGAGTTTGTAACTACCTCAGAAGGAAAAGGAAAAGTTGTTGGCTTAAATGTTTTAAAAAATAGAGTAAAA
ATCCGCTTTGGAGAATATAGCAAGGATTTTGAACTTGCAGAAATTGAGGTGAATCATGGCTGA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(56-140)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

45.662

84.231

0.385