Detailed information
Bioinformatically predicted
Overview
| Name | recR | Type | Machinery gene |
| Locus tag | I653_RS00135 | Genome accession | NC_020832 |
| Coordinates | 28871..29467 (+) | Length | 198 a.a. |
| NCBI ID | WP_003225425.1 | Uniprot ID | G4NT17 |
| Organism | Bacillus subtilis subsp. subtilis str. BAB-1 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 23871..34467
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I653_RS00110 (I653_00080) | sleL | 23872..25155 (-) | 1284 | WP_015382548.1 | glycoside hydrolase family 18 protein | - |
| I653_RS00115 (I653_00085) | yaaI | 25225..25770 (-) | 546 | WP_003226786.1 | isochorismatase family cysteine hydrolase | - |
| I653_RS00120 (I653_00090) | tadA | 25856..26341 (+) | 486 | WP_015482684.1 | tRNA adenosine(34) deaminase TadA | - |
| I653_RS00125 (I653_00095) | dnaX | 26818..28509 (+) | 1692 | WP_015482685.1 | DNA polymerase III subunit gamma/tau | - |
| I653_RS00130 (I653_00100) | ebfC | 28533..28856 (+) | 324 | WP_003225427.1 | YbaB/EbfC family nucleoid-associated protein | - |
| I653_RS00135 (I653_00105) | recR | 28871..29467 (+) | 597 | WP_003225425.1 | recombination protein RecR | Machinery gene |
| I653_RS00140 (I653_00110) | yaaL | 29485..29709 (+) | 225 | WP_003242387.1 | YaaL family protein | - |
| I653_RS00145 (I653_00115) | bofA | 29776..30039 (+) | 264 | WP_003225421.1 | sigma-K factor-processing regulator BofA | - |
Sequence
Protein
Download Length: 198 a.a. Molecular weight: 21974.53 Da Isoelectric Point: 5.3504
>NTDB_id=47402 I653_RS00135 WP_003225425.1 28871..29467(+) (recR) [Bacillus subtilis subsp. subtilis str. BAB-1]
MQYPEPISKLIDSFMKLPGIGPKTAVRLAFFVLGMKEDVVLDFAKALVNAKRNLTYCSVCGHITDQDPCYICEDTRRDKS
VICVVQDPKDVIAMEKMKEYNGQYHVLHGAISPMDGIGPEDIKIPELLKRLQDDQVTEVILATNPNIEGEATAMYISRLL
KPSGIKLSRIAHGLPVGGDLEYADEVTLSKALEGRREL
MQYPEPISKLIDSFMKLPGIGPKTAVRLAFFVLGMKEDVVLDFAKALVNAKRNLTYCSVCGHITDQDPCYICEDTRRDKS
VICVVQDPKDVIAMEKMKEYNGQYHVLHGAISPMDGIGPEDIKIPELLKRLQDDQVTEVILATNPNIEGEATAMYISRLL
KPSGIKLSRIAHGLPVGGDLEYADEVTLSKALEGRREL
Nucleotide
Download Length: 597 bp
>NTDB_id=47402 I653_RS00135 WP_003225425.1 28871..29467(+) (recR) [Bacillus subtilis subsp. subtilis str. BAB-1]
ATGCAATATCCTGAACCAATATCAAAGCTGATTGACAGCTTTATGAAATTGCCAGGGATCGGACCGAAAACAGCGGTTCG
TCTGGCTTTTTTTGTTCTAGGTATGAAAGAAGATGTAGTATTAGATTTTGCGAAAGCATTAGTAAATGCGAAACGCAACC
TGACATATTGTTCAGTTTGCGGGCATATTACAGACCAGGACCCTTGCTATATATGTGAAGATACGCGCAGGGATAAGTCT
GTTATCTGTGTTGTGCAAGACCCTAAGGATGTTATCGCTATGGAGAAAATGAAGGAATACAACGGACAGTATCACGTTCT
TCACGGCGCTATTTCTCCAATGGACGGCATCGGACCGGAGGATATTAAAATACCAGAATTGTTAAAACGATTACAGGATG
ATCAAGTGACAGAAGTGATTCTCGCGACAAACCCTAATATAGAAGGGGAAGCAACGGCGATGTATATATCTAGGCTCCTC
AAGCCGTCTGGTATTAAGCTCTCCCGTATTGCCCACGGACTGCCCGTCGGCGGTGACTTGGAATATGCTGACGAGGTCAC
TCTTTCTAAAGCACTTGAAGGAAGACGTGAATTGTAA
ATGCAATATCCTGAACCAATATCAAAGCTGATTGACAGCTTTATGAAATTGCCAGGGATCGGACCGAAAACAGCGGTTCG
TCTGGCTTTTTTTGTTCTAGGTATGAAAGAAGATGTAGTATTAGATTTTGCGAAAGCATTAGTAAATGCGAAACGCAACC
TGACATATTGTTCAGTTTGCGGGCATATTACAGACCAGGACCCTTGCTATATATGTGAAGATACGCGCAGGGATAAGTCT
GTTATCTGTGTTGTGCAAGACCCTAAGGATGTTATCGCTATGGAGAAAATGAAGGAATACAACGGACAGTATCACGTTCT
TCACGGCGCTATTTCTCCAATGGACGGCATCGGACCGGAGGATATTAAAATACCAGAATTGTTAAAACGATTACAGGATG
ATCAAGTGACAGAAGTGATTCTCGCGACAAACCCTAATATAGAAGGGGAAGCAACGGCGATGTATATATCTAGGCTCCTC
AAGCCGTCTGGTATTAAGCTCTCCCGTATTGCCCACGGACTGCCCGTCGGCGGTGACTTGGAATATGCTGACGAGGTCAC
TCTTTCTAAAGCACTTGAAGGAAGACGTGAATTGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| recR | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |
| recR | Streptococcus pneumoniae R6 |
62.121 |
100 |
0.621 |
| recR | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
52.041 |
98.99 |
0.515 |