Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   H5647_RS02410 Genome accession   NZ_CP060092
Coordinates   597625..598020 (-) Length   131 a.a.
NCBI ID   WP_045856025.1    Uniprot ID   -
Organism   Teredinibacter purpureus strain Bs12     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 592625..603020
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H5647_RS02390 - 593322..594044 (-) 723 WP_236074745.1 protein-glutamate O-methyltransferase CheR -
  H5647_RS22050 - 594037..594183 (-) 147 WP_236074747.1 hypothetical protein -
  H5647_RS02395 - 594205..596409 (-) 2205 WP_045856022.1 methyl-accepting chemotaxis protein -
  H5647_RS02400 - 596587..597126 (-) 540 WP_045856023.1 chemotaxis protein CheW -
  H5647_RS02405 pilH 597206..597568 (-) 363 WP_045856024.1 twitching motility response regulator PilH -
  H5647_RS02410 pilG 597625..598020 (-) 396 WP_045856025.1 twitching motility response regulator PilG Regulator
  H5647_RS02415 gshB 598306..599232 (+) 927 WP_408034019.1 glutathione synthase -
  H5647_RS02420 - 599240..600115 (+) 876 WP_045856027.1 energy transducer TonB -
  H5647_RS02425 - 600219..600824 (+) 606 WP_045856028.1 YqgE/AlgH family protein -
  H5647_RS02430 ruvX 600817..601260 (+) 444 WP_045856029.1 Holliday junction resolvase RuvX -
  H5647_RS02435 pilU 601275..602417 (-) 1143 WP_045856030.1 PilT/PilU family type 4a pilus ATPase Machinery gene

Sequence

Protein


Download         Length: 131 a.a.        Molecular weight: 14361.78 Da        Isoelectric Point: 9.0957

>NTDB_id=473916 H5647_RS02410 WP_045856025.1 597625..598020(-) (pilG) [Teredinibacter purpureus strain Bs12]
MDVNLEHLKVMVIDDSKTIRRTAETLLKKVGCTVVTATDGFDALAKIADTRPSIIFVDIMMPRLDGYQTCALIKNNSEFK
STPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKGELIGAIETHVKVARAS

Nucleotide


Download         Length: 396 bp        

>NTDB_id=473916 H5647_RS02410 WP_045856025.1 597625..598020(-) (pilG) [Teredinibacter purpureus strain Bs12]
ATGGACGTCAATCTTGAACACTTGAAAGTGATGGTTATTGATGACAGTAAAACCATCCGTCGAACGGCCGAAACATTGTT
GAAAAAGGTCGGTTGTACAGTGGTTACGGCCACTGATGGCTTCGATGCCTTAGCGAAGATCGCAGACACCCGGCCCAGTA
TTATTTTTGTGGATATTATGATGCCTCGCCTTGATGGCTATCAGACTTGCGCGTTAATTAAAAATAATAGCGAATTTAAA
TCGACACCCGTAATAATGCTATCGAGTAAAGATGGCCTTTTTGATAAAGCCAAAGGTCGTATCGTTGGTTCAGATCAATA
CTTAACAAAACCATTCAGCAAGGGTGAGCTGATTGGCGCTATCGAGACCCACGTAAAAGTGGCTCGAGCCAGCTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

72.8

95.42

0.695