Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   HNQ25_RS22365 Genome accession   NZ_CP060009
Coordinates   4789123..4789530 (-) Length   135 a.a.
NCBI ID   WP_017678433.1    Uniprot ID   A0A2G5FWL9
Organism   Pseudomonas sediminis strain B10D7D     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 4784123..4794530
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HNQ25_RS22345 (HNQ25_22345) - 4785090..4785950 (-) 861 WP_099522980.1 protein-glutamate O-methyltransferase -
  HNQ25_RS22350 (HNQ25_22350) - 4786011..4788047 (-) 2037 WP_179546069.1 methyl-accepting chemotaxis protein -
  HNQ25_RS22355 (HNQ25_22355) - 4788129..4788665 (-) 537 WP_099522893.1 chemotaxis protein CheW -
  HNQ25_RS22360 (HNQ25_22360) pilH 4788711..4789076 (-) 366 WP_099522894.1 twitching motility response regulator PilH -
  HNQ25_RS22365 (HNQ25_22365) pilG 4789123..4789530 (-) 408 WP_017678433.1 twitching motility response regulator PilG Regulator
  HNQ25_RS22370 (HNQ25_22370) gshB 4789773..4790729 (+) 957 WP_099522895.1 glutathione synthase -
  HNQ25_RS22375 (HNQ25_22375) - 4790818..4791714 (+) 897 WP_179546070.1 energy transducer TonB -
  HNQ25_RS22380 (HNQ25_22380) - 4791809..4792378 (+) 570 WP_099522897.1 YqgE/AlgH family protein -
  HNQ25_RS22385 (HNQ25_22385) ruvX 4792375..4792812 (+) 438 WP_143504664.1 Holliday junction resolvase RuvX -
  HNQ25_RS22390 (HNQ25_22390) pyrR 4792843..4793346 (+) 504 WP_179546071.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  HNQ25_RS22395 (HNQ25_22395) - 4793357..4794364 (+) 1008 WP_179546072.1 aspartate carbamoyltransferase catalytic subunit -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14785.16 Da        Isoelectric Point: 6.7123

>NTDB_id=473285 HNQ25_RS22365 WP_017678433.1 4789123..4789530(-) (pilG) [Pseudomonas sediminis strain B10D7D]
MEQHTEGLKVMVIDDSKTIRRTAETLLKKVGCDVITAVDGFDALAKIADTHPSIIFVDIMMPRLDGYQTCALIKNNSAFK
STPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKEELLGAIKAHVPDFTPVEQAS

Nucleotide


Download         Length: 408 bp        

>NTDB_id=473285 HNQ25_RS22365 WP_017678433.1 4789123..4789530(-) (pilG) [Pseudomonas sediminis strain B10D7D]
ATGGAACAGCATACCGAGGGTTTGAAAGTGATGGTGATCGACGATTCGAAAACGATTCGTCGCACCGCTGAAACTCTGCT
GAAAAAAGTGGGTTGTGATGTCATCACTGCGGTCGATGGCTTCGATGCCCTGGCCAAGATTGCCGACACGCATCCCAGCA
TCATCTTTGTTGACATCATGATGCCGCGTCTCGATGGGTATCAGACCTGTGCCCTGATCAAGAACAACAGTGCTTTCAAG
TCCACGCCAGTGATCATGCTGTCCTCCAAGGACGGTCTGTTCGACAAGGCCAAGGGGCGTATCGTCGGCTCCGACCAGTA
CCTGACCAAGCCTTTCAGCAAGGAAGAGCTGCTCGGTGCTATCAAAGCCCACGTGCCTGACTTCACCCCAGTGGAACAAG
CCTCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2G5FWL9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

76

92.593

0.704
  vicR Streptococcus mutans UA159

42.857

93.333

0.4