Detailed information    

insolico Bioinformatically predicted

Overview


Name   HI0659   Type   Machinery gene
Locus tag   R2846_RS08500 Genome accession   NC_017452
Coordinates   1754702..1754998 (+) Length   98 a.a.
NCBI ID   WP_005650837.1    Uniprot ID   Q4QMQ7
Organism   Haemophilus influenzae R2846     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 1749702..1759998
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  R2846_RS08480 - 1750637..1750801 (-) 165 WP_032823763.1 hypothetical protein -
  R2846_RS09480 - 1750929..1751018 (-) 90 Protein_1648 ABC transporter -
  R2846_RS08490 (R2846_1673) - 1751346..1754381 (+) 3036 WP_014551122.1 TonB-dependent hemoglobin/transferrin/lactoferrin family receptor -
  R2846_RS08495 (R2846_1674) - 1754488..1754709 (+) 222 WP_005658624.1 type II toxin-antitoxin system RelE/ParE family toxin -
  R2846_RS08500 (R2846_1675) HI0659 1754702..1754998 (+) 297 WP_005650837.1 helix-turn-helix domain-containing protein Machinery gene
  R2846_RS08505 (R2846_1676) - 1755165..1757081 (+) 1917 WP_014551124.1 ABC transporter ATP-binding protein -
  R2846_RS08510 (R2846_1677) - 1757091..1757639 (+) 549 WP_014551125.1 topoisomerase DNA-binding C4 zinc finger domain-containing protein -
  R2846_RS08515 (R2846_1678) - 1757655..1758206 (+) 552 WP_014551126.1 Sua5/YciO/YrdC/YwlC family protein -
  R2846_RS08520 (R2846_1679) aroE 1758210..1759016 (+) 807 WP_014551127.1 shikimate dehydrogenase -
  R2846_RS08525 (R2846_1680) - 1759028..1759786 (+) 759 WP_014551128.1 DUF3800 domain-containing protein -

Sequence


Protein


Download         Length: 98 a.a.        Molecular weight: 11092.94 Da        Isoelectric Point: 10.3139

>NTDB_id=47313 R2846_RS08500 WP_005650837.1 1754702..1754998(+) (HI0659) [Haemophilus influenzae R2846]
MNKISPLGSNWNEFEQQIFNEEEIRESNLRVALIKELITSRQQLGISQKQLETLSGVKQPMIARIEKGQTNPQLETLLKL
LAPLGKTLSIVPLRVKNA

Nucleotide


Download         Length: 297 bp        

>NTDB_id=47313 R2846_RS08500 WP_005650837.1 1754702..1754998(+) (HI0659) [Haemophilus influenzae R2846]
ATGAATAAAATCAGCCCATTAGGTTCAAATTGGAATGAGTTTGAACAGCAAATTTTCAATGAAGAAGAAATCCGAGAAAG
TAATTTGCGTGTAGCCTTAATTAAAGAATTGATTACTTCTCGCCAACAACTTGGGATTTCCCAAAAACAACTTGAAACCT
TAAGCGGTGTGAAGCAACCTATGATTGCACGCATTGAAAAAGGACAAACGAATCCTCAGCTTGAAACGTTATTAAAATTG
CTCGCTCCTTTAGGGAAAACCCTGTCGATTGTGCCTCTAAGGGTAAAAAATGCCTAA

Domains


Predicted by InterproScan.

(41-89)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB Q4QMQ7

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  HI0659 Haemophilus influenzae Rd KW20

100

100

1


Multiple sequence alignment