Detailed information NTG0473117

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: H5J27_RS10765
• Genome accession: NZ_CP059995
• Coordinates: 2315298..2317523 (+)
• Length: 741 a.a.
• NCBI ID: WP_058173609.1
• Uniprot ID: -
• Organism: Pseudomonas aeruginosa strain NY3045
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2310298..2322523

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H5J27_RS10740 (H5J27_10740)	-	2310604..2311203 (-)	600	WP_033975956.1	PilZ domain-containing protein	-
H5J27_RS10745 (H5J27_10745)	-	2311306..2312556 (+)	1251	WP_003091170.1	lipoprotein-releasing ABC transporter permease subunit	-
H5J27_RS10750 (H5J27_10750)	lolD	2312549..2313232 (+)	684	WP_003091168.1	lipoprotein-releasing ABC transporter ATP-binding protein LolD	-
H5J27_RS10755 (H5J27_10755)	-	2313302..2314546 (+)	1245	WP_033968896.1	lipoprotein-releasing ABC transporter permease subunit	-
H5J27_RS10760 (H5J27_10760)	-	2314634..2315167 (-)	534	WP_003091165.1	DUF2062 domain-containing protein	-
H5J27_RS10765 (H5J27_10765)	comA	2315298..2317523 (+)	2226	WP_058173609.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
H5J27_RS10770 (H5J27_10770)	exbB	2317596..2318231 (+)	636	WP_003091163.1	MotA/TolQ/ExbB proton channel family protein	Machinery gene
H5J27_RS10775 (H5J27_10775)	-	2318228..2318668 (+)	441	WP_003091161.1	biopolymer transporter ExbD	-
H5J27_RS10780 (H5J27_10780)	lpxK	2318668..2319666 (+)	999	WP_003091159.1	tetraacyldisaccharide 4'-kinase	-
H5J27_RS10785 (H5J27_10785)	-	2319704..2319889 (+)	186	WP_003091157.1	Trm112 family protein	-
H5J27_RS10790 (H5J27_10790)	kdsB	2319889..2320653 (+)	765	WP_033968892.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
H5J27_RS10795 (H5J27_10795)	-	2320653..2321117 (+)	465	WP_003091154.1	low molecular weight protein-tyrosine-phosphatase	-
H5J27_RS10800 (H5J27_10800)	murB	2321114..2322133 (+)	1020	WP_042168960.1	UDP-N-acetylmuramate dehydrogenase	-

Sequence

Protein

• Length: 741 a.a.
• Molecular weight: 79911.51 Da
• Isoelectric Point: 9.9953

>NTDB_id=473117 H5J27_RS10765 WP_058173609.1 2315298..2317523(+) (comA) [Pseudomonas aeruginosa strain NY3045]
MRLGLPALAAGLLALRFLAELPSVGWLLGMAAAGLLLLFGRLYWLGLFLLGFAWACGSAQVALDGRLAAELDGRTLWLEG
RVVDLPASGEGITRFRLEEVSGARGVLLPERLRLSWRGAPPLMGGERWRLAVTLKRPRGLVNAAGFDYEAWLLGQRVGAV
GSVKAGQRLQPASGLDAWRDAWRQRLLAVDAQGRGAALAALVLGDGSGLSAAEWRMFQDTGTVHLMVISGSHISLLAGML
YGLVAALHRLGCWPRRLPWLPCACALGLLGAWSYGLMAGFEVPVRRACLMVSLALVWRLRFHHLGLLTPLLGTLVLVLLV
EPLASLQAGFWLSFLAVALLLWLFAGRLGRWRWWAAWGRAQWGMALGLAMPLLALGLPLSLSGALANLLAVPWIELLVVP
PALAGSLLLWVPGLGEGLLRAAGVSLDLLFRALGLLAGLAEAWQPPAAAAWSVALGMLGALCWLAPAGLPLRALGAVLLL
PALLPSSPPVEWGWAEVRMLDVGQGLAVLVRTREHALLYDSGARQGALDMGERVVVPVLRSLDLRRLDGLLLSHADSDHA
GGAPTVASRFPPGWLVSGEPARLPSPLFADSCDERSWSWDGVVFEQWAWAQAGDSNDRSCVLRVEADGEVLLLTGDMSRA
AEHAWLARQADPRVDWLLAPHHGSRSSSGVAFVLRTRPRHVLVSRGWRNAFGHPHGEVMERYARVAAQVHDTARDGALTF
LLGSRGGARRERDSAHFWREK

Nucleotide

• Length: 2226 bp

>NTDB_id=473117 H5J27_RS10765 WP_058173609.1 2315298..2317523(+) (comA) [Pseudomonas aeruginosa strain NY3045]
ATGCGCCTGGGATTGCCAGCCCTCGCCGCGGGGCTGCTGGCCCTGCGCTTCCTGGCGGAATTGCCGTCGGTCGGCTGGCT
GCTGGGCATGGCCGCCGCCGGACTGTTGCTGCTGTTCGGCCGGCTGTACTGGCTGGGCTTGTTCCTGCTCGGGTTCGCCT
GGGCCTGCGGCTCGGCGCAAGTCGCCCTGGACGGACGCCTGGCCGCCGAGCTGGATGGTCGCACCCTTTGGCTGGAGGGG
CGTGTGGTCGATCTGCCGGCGAGCGGCGAGGGCATCACGCGCTTCCGGCTGGAGGAGGTCAGTGGCGCGCGGGGCGTCCT
TCTTCCCGAGCGTCTGCGCCTGAGCTGGCGTGGTGCGCCGCCGCTGATGGGCGGCGAACGCTGGCGCCTGGCGGTGACCC
TGAAACGCCCTCGCGGCCTGGTGAACGCGGCGGGTTTCGACTACGAAGCCTGGTTGTTGGGGCAGCGGGTCGGTGCCGTT
GGATCGGTGAAGGCGGGCCAGCGCCTGCAGCCGGCCAGTGGCCTGGATGCCTGGCGCGACGCCTGGCGCCAGCGCCTCCT
GGCGGTCGACGCGCAGGGGCGCGGCGCCGCCCTGGCGGCGCTGGTGCTGGGGGATGGCTCTGGATTGAGCGCGGCCGAGT
GGCGCATGTTCCAGGACACCGGCACCGTGCATCTGATGGTCATCTCCGGTTCGCATATCTCGTTGCTGGCGGGGATGCTC
TATGGCCTGGTGGCGGCCTTGCATCGCCTGGGCTGCTGGCCGCGGCGCCTGCCCTGGCTGCCCTGTGCCTGCGCCCTGGG
TTTGCTTGGTGCCTGGAGCTACGGGTTGATGGCGGGCTTCGAGGTCCCGGTGCGGCGCGCCTGCCTGATGGTCAGCCTGG
CGCTGGTCTGGCGCCTGCGTTTCCACCACCTGGGCTTGCTGACCCCGCTGCTGGGAACGCTGGTGCTGGTCTTGCTGGTC
GAGCCGCTGGCCAGCCTGCAGGCGGGGTTCTGGCTGTCGTTCCTGGCGGTTGCCCTGCTGCTCTGGCTGTTCGCCGGGCG
CCTTGGGCGCTGGCGCTGGTGGGCGGCCTGGGGGCGTGCGCAGTGGGGGATGGCGCTGGGGCTGGCGATGCCGCTGCTGG
CGCTGGGCCTGCCGTTGAGCCTGAGCGGAGCGCTGGCCAACCTGCTGGCGGTACCTTGGATCGAACTGCTGGTAGTGCCC
CCGGCCCTGGCGGGGAGCCTGCTGCTGTGGGTACCCGGGCTGGGCGAGGGTCTGCTTCGCGCCGCTGGCGTTTCGCTGGA
CCTGCTGTTTCGTGCGCTTGGCCTGCTGGCGGGCCTGGCCGAGGCCTGGCAGCCACCCGCCGCAGCGGCCTGGAGCGTAG
CGCTGGGCATGCTCGGCGCGCTCTGCTGGCTGGCGCCGGCTGGCTTGCCGTTGCGTGCCCTCGGTGCCGTGTTGCTACTG
CCGGCGTTGTTGCCGTCATCGCCGCCTGTCGAATGGGGGTGGGCGGAAGTGCGGATGCTGGACGTCGGCCAGGGGCTGGC
CGTGCTGGTGCGTACCCGGGAGCATGCCTTGCTCTATGACAGCGGTGCGCGGCAGGGGGCATTAGACATGGGCGAGCGGG
TGGTGGTGCCGGTGCTGCGCAGCCTGGACTTGCGACGCCTGGACGGCCTGTTGCTGAGCCATGCCGACAGCGACCATGCA
GGCGGTGCTCCTACGGTCGCTTCCCGATTCCCGCCGGGTTGGCTGGTCAGCGGCGAACCCGCGCGCCTGCCTTCGCCGTT
GTTCGCGGACAGCTGCGACGAGCGGAGCTGGTCCTGGGATGGCGTGGTTTTCGAACAGTGGGCATGGGCGCAGGCCGGCG
ACAGCAACGACCGCTCCTGCGTGCTGAGGGTCGAGGCCGATGGCGAAGTCCTGCTGCTGACCGGGGACATGTCGCGTGCG
GCCGAGCATGCCTGGCTGGCGCGACAGGCCGATCCGCGGGTCGACTGGTTGCTGGCGCCGCACCACGGCAGCCGCAGCTC
CTCCGGAGTCGCCTTCGTGTTGCGTACGCGGCCTCGCCATGTGCTGGTCTCGCGAGGTTGGCGCAACGCCTTCGGCCATC
CCCATGGCGAAGTGATGGAGCGTTACGCGAGGGTCGCCGCGCAGGTCCACGACACGGCACGCGACGGTGCCCTGACGTTT
CTCCTCGGAAGCCGTGGCGGTGCACGCCGGGAGCGTGATTCGGCGCACTTCTGGCGGGAAAAATGA

Domains

Predicted by InterproScan.

• Domain of unknown function (DUF4131) (DUF4131) (21-168)

• Competence protein (Competence) (201-464)

• Metallo-beta-lactamase superfamily (Lactamase_B) (501-666)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	58.252	97.301	0.567
comA	Ralstonia pseudosolanacearum GMI1000	35.611	100	0.366