Detailed information
Bioinformatically predicted
Overview
| Name | comB | Type | Machinery gene |
| Locus tag | R2846_RS00725 | Genome accession | NC_017452 |
| Coordinates | 142381..142887 (+) | Length | 168 a.a. |
| NCBI ID | WP_014550412.1 | Uniprot ID | - |
| Organism | Haemophilus influenzae R2846 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 137381..147887
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| R2846_RS00705 (R2846_0138) | - | 137487..137816 (-) | 330 | WP_005629464.1 | YbaB/EbfC family nucleoid-associated protein | - |
| R2846_RS00710 (R2846_0139) | - | 137969..138814 (-) | 846 | WP_005686902.1 | 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ | - |
| R2846_RS00715 (R2846_0140) | - | 138890..141484 (-) | 2595 | WP_014550411.1 | penicillin-binding protein 1A | - |
| R2846_RS00720 (R2846_0141) | comA | 141583..142380 (+) | 798 | WP_013527435.1 | pilus assembly protein PilM | Machinery gene |
| R2846_RS00725 (R2846_0142) | comB | 142381..142887 (+) | 507 | WP_014550412.1 | competence protein ComB | Machinery gene |
| R2846_RS00730 (R2846_0143) | comC | 142884..143405 (+) | 522 | WP_005662592.1 | competence protein ComC | Machinery gene |
| R2846_RS00735 (R2846_0144) | comD | 143402..143815 (+) | 414 | WP_014550413.1 | pilus assembly protein PilP | Machinery gene |
| R2846_RS00740 (R2846_0145) | comE | 143825..145162 (+) | 1338 | WP_014550414.1 | type IV pilus secretin PilQ family protein | Machinery gene |
| R2846_RS00745 (R2846_0146) | - | 145175..145861 (+) | 687 | WP_014550415.1 | ComF family protein | - |
| R2846_RS00750 (R2846_0147) | nfuA | 145937..146533 (+) | 597 | WP_005656459.1 | Fe-S biogenesis protein NfuA | - |
| R2846_RS00755 (R2846_0148) | nudC | 146600..147394 (+) | 795 | WP_014550416.1 | NAD(+) diphosphatase | - |
Sequence
Protein
Download Length: 168 a.a. Molecular weight: 19684.56 Da Isoelectric Point: 7.4218
>NTDB_id=47285 R2846_RS00725 WP_014550412.1 142381..142887(+) (comB) [Haemophilus influenzae R2846]
MSMNLLPWRTYQHQKCLRRLAFYIALFILLAINLMLAFSNLIEQQKQNLQAQQKSFEQLNQQLHKNTMQIDQLRSAVKVG
EVLTSIPNEQVKKSLQQLSELPFQQGELNKFKQDANNLSLEGNAQDQTEFELIHQFLKKHFPNVKLSQVQPEQDTLFFHF
DVEQGAEK
MSMNLLPWRTYQHQKCLRRLAFYIALFILLAINLMLAFSNLIEQQKQNLQAQQKSFEQLNQQLHKNTMQIDQLRSAVKVG
EVLTSIPNEQVKKSLQQLSELPFQQGELNKFKQDANNLSLEGNAQDQTEFELIHQFLKKHFPNVKLSQVQPEQDTLFFHF
DVEQGAEK
Nucleotide
Download Length: 507 bp
>NTDB_id=47285 R2846_RS00725 WP_014550412.1 142381..142887(+) (comB) [Haemophilus influenzae R2846]
ATGTCGATGAATTTATTGCCTTGGCGTACTTATCAACATCAAAAGTGTTTACGTCGTTTAGCTTTTTATATCGCTTTATT
TATCTTGCTTGCTATTAATTTAATGTTGGCTTTTAGCAATTTGATTGAACAACAGAAACAAAATTTGCAGGCACAGCAAA
AGTCGTTTGAACAACTTAATCAACAGCTTCATAAAAATACCATGCAAATTGATCAGTTACGCAGTGCGGTGAAAGTTGGT
GAAGTTTTGACATCTATTCCCAACGAGCAAGTAAAAAAGAGTTTACAACAGCTAAGTGAATTACCTTTTCAACAAGGAGA
ACTGAATAAATTTAAACAAGATGCGAATAACTTAAGCTTGGAAGGTAACGCGCAAGATCAAACAGAATTTGAACTGATTC
ATCAATTTTTAAAGAAACATTTTCCCAATGTGAAATTAAGTCAGGTTCAACCTGAACAAGATACATTGTTTTTTCACTTT
GATGTGGAACAAGGGGCGGAAAAATGA
ATGTCGATGAATTTATTGCCTTGGCGTACTTATCAACATCAAAAGTGTTTACGTCGTTTAGCTTTTTATATCGCTTTATT
TATCTTGCTTGCTATTAATTTAATGTTGGCTTTTAGCAATTTGATTGAACAACAGAAACAAAATTTGCAGGCACAGCAAA
AGTCGTTTGAACAACTTAATCAACAGCTTCATAAAAATACCATGCAAATTGATCAGTTACGCAGTGCGGTGAAAGTTGGT
GAAGTTTTGACATCTATTCCCAACGAGCAAGTAAAAAAGAGTTTACAACAGCTAAGTGAATTACCTTTTCAACAAGGAGA
ACTGAATAAATTTAAACAAGATGCGAATAACTTAAGCTTGGAAGGTAACGCGCAAGATCAAACAGAATTTGAACTGATTC
ATCAATTTTTAAAGAAACATTTTCCCAATGTGAAATTAAGTCAGGTTCAACCTGAACAAGATACATTGTTTTTTCACTTT
GATGTGGAACAAGGGGCGGAAAAATGA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comB | Haemophilus influenzae 86-028NP |
98.214 |
100 |
0.982 |
| comB | Haemophilus influenzae Rd KW20 |
98.214 |
100 |
0.982 |