Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | H4993_RS03715 | Genome accession | NZ_CP059966 |
| Coordinates | 708205..708507 (+) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni strain C203 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 703205..713507
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H4993_RS03690 (H4993_03690) | rpsR | 703567..703827 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| H4993_RS03695 (H4993_03695) | lon | 703888..706263 (-) | 2376 | WP_002868636.1 | endopeptidase La | - |
| H4993_RS03700 (H4993_03700) | - | 706280..706927 (-) | 648 | WP_002852961.1 | outer membrane protein assembly factor BamD | - |
| H4993_RS03705 (H4993_03705) | fliW | 707088..707477 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| H4993_RS03710 (H4993_03710) | proC | 707477..708208 (+) | 732 | WP_002868635.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| H4993_RS03715 (H4993_03715) | ctsT | 708205..708507 (+) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| H4993_RS03720 (H4993_03720) | - | 708504..709166 (+) | 663 | WP_002858296.1 | hypothetical protein | - |
| H4993_RS03725 (H4993_03725) | - | 709163..709615 (+) | 453 | WP_002859148.1 | hypothetical protein | - |
| H4993_RS03730 (H4993_03730) | hemD | 709612..710241 (-) | 630 | WP_002868634.1 | uroporphyrinogen-III synthase | - |
| H4993_RS03735 (H4993_03735) | thiE | 710219..710851 (-) | 633 | WP_002852670.1 | thiamine phosphate synthase | - |
| H4993_RS03740 (H4993_03740) | thiD | 710841..711653 (-) | 813 | WP_002868633.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| H4993_RS03745 (H4993_03745) | - | 711650..712336 (-) | 687 | WP_002868632.1 | endonuclease III domain-containing protein | - |
| H4993_RS03750 (H4993_03750) | - | 712333..713094 (-) | 762 | WP_002852748.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=472810 H4993_RS03715 WP_002853046.1 708205..708507(+) (ctsT) [Campylobacter jejuni strain C203]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=472810 H4993_RS03715 WP_002853046.1 708205..708507(+) (ctsT) [Campylobacter jejuni strain C203]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |