Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | H4994_RS07680 | Genome accession | NZ_CP059965 |
| Coordinates | 1453669..1453971 (+) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni strain C219 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1448669..1458971
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H4994_RS07655 (H4994_07655) | rpsR | 1449032..1449292 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| H4994_RS07660 (H4994_07660) | lon | 1449352..1451727 (-) | 2376 | WP_002853487.1 | endopeptidase La | - |
| H4994_RS07665 (H4994_07665) | - | 1451744..1452391 (-) | 648 | WP_011049880.1 | outer membrane protein assembly factor BamD | - |
| H4994_RS07670 (H4994_07670) | fliW | 1452552..1452941 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| H4994_RS07675 (H4994_07675) | proC | 1452941..1453672 (+) | 732 | WP_002859150.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| H4994_RS07680 (H4994_07680) | ctsT | 1453669..1453971 (+) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| H4994_RS07685 (H4994_07685) | - | 1453968..1454630 (+) | 663 | WP_146314457.1 | hypothetical protein | - |
| H4994_RS07690 (H4994_07690) | - | 1454627..1455079 (+) | 453 | WP_002859148.1 | hypothetical protein | - |
| H4994_RS07695 (H4994_07695) | hemD | 1455076..1455705 (-) | 630 | WP_002859147.1 | uroporphyrinogen-III synthase | - |
| H4994_RS07700 (H4994_07700) | thiE | 1455683..1456315 (-) | 633 | WP_060809525.1 | thiamine phosphate synthase | - |
| H4994_RS07705 (H4994_07705) | thiD | 1456305..1457117 (-) | 813 | WP_002852691.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| H4994_RS07710 (H4994_07710) | - | 1457114..1457800 (-) | 687 | WP_060809526.1 | endonuclease III domain-containing protein | - |
| H4994_RS07715 (H4994_07715) | - | 1457797..1458558 (-) | 762 | WP_002872533.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=472801 H4994_RS07680 WP_002853046.1 1453669..1453971(+) (ctsT) [Campylobacter jejuni strain C219]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=472801 H4994_RS07680 WP_002853046.1 1453669..1453971(+) (ctsT) [Campylobacter jejuni strain C219]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |