Detailed information NTG0472798

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: H4994_RS07490
• Genome accession: NZ_CP059965
• Coordinates: 1419666..1420625 (+)
• Length: 319 a.a.
• NCBI ID: WP_057044069.1
• Uniprot ID: -
• Organism: Campylobacter jejuni strain C219
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1414666..1425625

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H4994_RS07460 (H4994_07460)	-	1414669..1415415 (+)	747	WP_002776720.1	NAD+ synthase	-
H4994_RS07465 (H4994_07465)	-	1415415..1416347 (+)	933	WP_002776725.1	tetraacyldisaccharide 4'-kinase	-
H4994_RS07470 (H4994_07470)	thrC	1416334..1417746 (+)	1413	WP_002799649.1	threonine synthase	-
H4994_RS07475 (H4994_07475)	kdsB	1417743..1418462 (+)	720	WP_002859834.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
H4994_RS07480 (H4994_07480)	-	1418551..1418658 (+)	108	Protein_1464	flagellar biosynthesis protein FlgG	-
H4994_RS07485 (H4994_07485)	waaV	1418795..1419607 (-)	813	WP_002935342.1	glycosyltransferase family 2 protein	-
H4994_RS07490 (H4994_07490)	waaF	1419666..1420625 (+)	960	WP_057044069.1	glycosyltransferase family 9 protein	Regulator
H4994_RS07495 (H4994_07495)	gmhA	1420606..1421166 (-)	561	WP_002859252.1	D-sedoheptulose 7-phosphate isomerase	-
H4994_RS07500 (H4994_07500)	rfaE1	1421163..1422548 (-)	1386	WP_002859253.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
H4994_RS07505 (H4994_07505)	rfaD	1422541..1423494 (-)	954	WP_002859254.1	ADP-glyceromanno-heptose 6-epimerase	-
H4994_RS07510 (H4994_07510)	gmhB	1423495..1424056 (-)	562	Protein_1470	D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase	-
H4994_RS07515 (H4994_07515)	-	1424137..1424439 (+)	303	WP_002852762.1	cytochrome c	-
H4994_RS07520 (H4994_07520)	ccoS	1424462..1424668 (-)	207	WP_002852798.1	cbb3-type cytochrome oxidase assembly protein CcoS	-

Sequence

Protein

• Length: 319 a.a.
• Molecular weight: 36740.45 Da
• Isoelectric Point: 10.3627

>NTDB_id=472798 H4994_RS07490 WP_057044069.1 1419666..1420625(+) (waaF) [Campylobacter jejuni strain C219]
MKIFIHLPTWLGDAVMASLALYAIKEHFKNAQFILYGSLVSTALFKEFPNSKIIIENKLSRYKQALSLRKELGKIDFSFA
FRSAFSSKIILHILKTKQRYFFDKNKHKEEHQVLKYLYFIENSLSIKAHFKDLKLPFKLKFQNPLVLKNGKKILGINPGA
SFGSAKRWDASYFAKVALNFSQSHEILIFGAGKVEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHLSAVYKVKTVAIFGPTKFTQTSPWQNQNAKLVHLDLACMPCMQKICPLKHHKCMKDLKPQRVIEEARNLLKNPHL

Nucleotide

• Length: 960 bp

>NTDB_id=472798 H4994_RS07490 WP_057044069.1 1419666..1420625(+) (waaF) [Campylobacter jejuni strain C219]
ATGAAAATTTTTATACATCTTCCCACTTGGCTAGGCGATGCAGTGATGGCTTCACTTGCTTTATACGCTATAAAAGAACA
TTTTAAAAATGCTCAATTTATCCTTTATGGATCTTTGGTTTCCACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACTATCCCGTTATAAACAAGCTCTATCTTTACGCAAAGAACTTGGTAAGATCGATTTTAGCTTTGCT
TTTAGATCTGCGTTTTCTTCTAAGATTATCTTACATATTCTTAAAACAAAACAAAGATATTTTTTTGACAAAAACAAGCA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACTCACTTAGTATAAAAGCTCATTTTAAAGACTTAA
AGCTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTGTCTTAAAAAATGGCAAAAAAATTCTAGGAATCAACCCTGGCGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTAGCTTTAAATTTCAGCCAAAGTCATGAGATTTT
AATCTTTGGTGCAGGAAAAGTCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACCACCATCAAAACCCTTTGTCAAAATATTGCTTTTTGTGATCTTTTCATAACAAATGACAGT
GGTCCTATGCACCTAAGTGCGGTTTATAAGGTAAAAACCGTGGCTATTTTTGGCCCTACGAAATTTACTCAAACTTCACC
TTGGCAAAATCAAAACGCAAAATTAGTACACTTAGATCTAGCTTGTATGCCTTGTATGCAAAAAATCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATTTAAAGCCTCAAAGGGTTATAGAAGAAGCTAGAAATTTACTTAAAAACCCTCATCTATAA

Domains

Predicted by InterproScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (96-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	94.044	100	0.94