Detailed information    

insolico Bioinformatically predicted

Overview

Name   phrC   Type   Regulator
Locus tag   H4K32_RS06395 Genome accession   NZ_CP059855
Coordinates   1212669..1212788 (-) Length   39 a.a.
NCBI ID   WP_003156334.1    Uniprot ID   I2C1C3
Organism   Bacillus velezensis strain Pm9     
Function   antagonize RapC (predicted from homology)   
Competence regulation

Genomic Context

Location: 1207669..1217788
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H4K32_RS06370 - 1207908..1208666 (-) 759 WP_003156330.1 ABC transporter ATP-binding protein -
  H4K32_RS06375 - 1208660..1209607 (-) 948 WP_069448545.1 iron chelate uptake ABC transporter family permease subunit -
  H4K32_RS06380 ceuB 1209597..1210550 (-) 954 WP_003156332.1 ABC transporter permease Machinery gene
  H4K32_RS06385 - 1210965..1212329 (+) 1365 WP_014304341.1 aspartate kinase -
  H4K32_RS06390 - 1212409..1212519 (+) 111 WP_369719092.1 YjcZ family sporulation protein -
  H4K32_RS06395 phrC 1212669..1212788 (-) 120 WP_003156334.1 PhrC/PhrF family phosphatase-inhibitory pheromone Regulator
  H4K32_RS06400 rapC 1212772..1213920 (-) 1149 WP_003156336.1 Rap family tetratricopeptide repeat protein Regulator
  H4K32_RS06405 - 1214073..1215506 (-) 1434 WP_161625271.1 HAMP domain-containing sensor histidine kinase -
  H4K32_RS06410 - 1215493..1216176 (-) 684 WP_103695313.1 response regulator transcription factor -

Sequence

Protein


Download         Length: 39 a.a.        Molecular weight: 4228.96 Da        Isoelectric Point: 8.0285

>NTDB_id=472277 H4K32_RS06395 WP_003156334.1 1212669..1212788(-) (phrC) [Bacillus velezensis strain Pm9]
MKLKSKWFVICLAAAAIFTVTGAGQTDQAEFHVAERGMT

Nucleotide


Download         Length: 120 bp        

>NTDB_id=472277 H4K32_RS06395 WP_003156334.1 1212669..1212788(-) (phrC) [Bacillus velezensis strain Pm9]
ATGAAATTGAAATCTAAATGGTTTGTTATTTGTTTAGCAGCCGCCGCGATTTTTACAGTGACAGGTGCAGGCCAGACAGA
TCAGGCTGAATTCCATGTAGCTGAAAGAGGAATGACGTGA

Domains

Predicted by InterproScan.

Rap-phr extracellular signalling (PhrC_PhrF)

(3-39)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB I2C1C3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  phrC Bacillus subtilis subsp. subtilis str. 168

70

100

0.718