Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   H4K32_RS06380 Genome accession   NZ_CP059855
Coordinates   1209597..1210550 (-) Length   317 a.a.
NCBI ID   WP_003156332.1    Uniprot ID   -
Organism   Bacillus velezensis strain Pm9     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1204597..1215550
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H4K32_RS06360 - 1205476..1206900 (+) 1425 WP_015388705.1 MDR family MFS transporter -
  H4K32_RS06365 - 1206942..1207886 (-) 945 WP_003156329.1 siderophore ABC transporter substrate-binding protein -
  H4K32_RS06370 - 1207908..1208666 (-) 759 WP_003156330.1 ABC transporter ATP-binding protein -
  H4K32_RS06375 - 1208660..1209607 (-) 948 WP_069448545.1 iron chelate uptake ABC transporter family permease subunit -
  H4K32_RS06380 ceuB 1209597..1210550 (-) 954 WP_003156332.1 ABC transporter permease Machinery gene
  H4K32_RS06385 - 1210965..1212329 (+) 1365 WP_014304341.1 aspartate kinase -
  H4K32_RS06390 - 1212409..1212519 (+) 111 WP_369719092.1 YjcZ family sporulation protein -
  H4K32_RS06395 phrC 1212669..1212788 (-) 120 WP_003156334.1 PhrC/PhrF family phosphatase-inhibitory pheromone Regulator
  H4K32_RS06400 rapC 1212772..1213920 (-) 1149 WP_003156336.1 Rap family tetratricopeptide repeat protein Regulator
  H4K32_RS06405 - 1214073..1215506 (-) 1434 WP_161625271.1 HAMP domain-containing sensor histidine kinase -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 34959.26 Da        Isoelectric Point: 9.6741

>NTDB_id=472276 H4K32_RS06380 WP_003156332.1 1209597..1210550(-) (ceuB) [Bacillus velezensis strain Pm9]
MKLRYLLLLLAVLACTSIFIGVEDLSPLDIFHLNKEQAGTLFDSRLPRLVSIIIAGMSLSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLMLFTSASPLVKMSIAFIFALAGNFLFMKILERIKFNDAIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNLSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTVAGMGESFSVNLGLKYKRVVNIGLIIVSLIASLVILTVGM
LPFLGLIIPNMVSIYKGDNLRSSLPHTALLGAVFVLFCDILGRVIIFPYEISIGLMVGVIGSGIFLYMLLRRKAYES

Nucleotide


Download         Length: 954 bp        

>NTDB_id=472276 H4K32_RS06380 WP_003156332.1 1209597..1210550(-) (ceuB) [Bacillus velezensis strain Pm9]
ATGAAGCTACGTTACTTACTTTTGCTACTGGCGGTTTTGGCGTGTACTTCTATATTTATCGGTGTAGAAGATTTGTCGCC
GCTGGATATTTTTCATTTAAATAAAGAACAGGCAGGTACATTGTTTGACAGCCGGCTGCCGCGTTTGGTGAGCATTATCA
TCGCCGGCATGAGCCTGAGCATCTGCGGATTAATCATGCAGCAGATCAGCCGGAATAAATTTGTATCGCCGACGACTGCG
GGAACGATGGACTGGGCAAGGCTCGGAATTTTGATTTCATTAATGCTTTTTACGTCAGCGAGCCCGCTTGTGAAAATGTC
TATCGCTTTTATTTTCGCGTTGGCGGGAAATTTCCTTTTCATGAAAATCCTCGAGAGAATCAAGTTCAATGATGCGATTT
TTATTCCTCTCGTCGGTTTAATGCTTGGGAACATCGTCAGCTCAATCGCCACGTTTATCGCATATAAATACGACCTGATC
CAAAACCTGTCATCTTGGCTGCAGGGAGATTTCTCACTGGTCGTTAAAGGCCGGTATGAGCTTTTATATCTGAGTATCCC
GCTGGTGATCATCGCTTATGTGTATGCGGATAAATTTACGGTGGCGGGAATGGGAGAGAGCTTTTCCGTCAATCTCGGCC
TGAAATACAAACGCGTCGTCAATATCGGTCTGATTATCGTGTCGCTCATCGCTTCACTGGTGATCCTGACCGTCGGGATG
CTGCCGTTTCTCGGTTTGATCATTCCCAATATGGTGTCGATTTACAAAGGGGACAACCTGAGGAGCAGCCTGCCTCACAC
AGCTCTCTTGGGCGCTGTTTTTGTGCTGTTTTGCGACATTTTGGGAAGGGTGATCATCTTCCCGTACGAAATTTCCATCG
GCCTGATGGTCGGTGTTATCGGCAGCGGCATCTTCCTGTATATGCTGTTAAGGAGAAAAGCATATGAGTCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

53.481

99.685

0.533