Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   H3M14_RS05335 Genome accession   NZ_CP059697
Coordinates   1056875..1058152 (+) Length   425 a.a.
NCBI ID   WP_112260852.1    Uniprot ID   -
Organism   Latilactobacillus sakei strain CBA3635     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1051875..1063152
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H3M14_RS05320 (H3M14_05320) - 1052180..1054927 (-) 2748 WP_061827028.1 YhgE/Pip domain-containing protein -
  H3M14_RS05325 (H3M14_05325) - 1055095..1055850 (+) 756 WP_061827029.1 isoprenyl transferase -
  H3M14_RS05330 (H3M14_05330) - 1055881..1056669 (+) 789 WP_182159211.1 phosphatidate cytidylyltransferase -
  H3M14_RS05335 (H3M14_05335) eeP 1056875..1058152 (+) 1278 WP_112260852.1 RIP metalloprotease RseP Regulator
  H3M14_RS05340 (H3M14_05340) - 1058178..1059887 (+) 1710 WP_016265345.1 proline--tRNA ligase -

Sequence

Protein


Download         Length: 425 a.a.        Molecular weight: 46735.47 Da        Isoelectric Point: 9.6558

>NTDB_id=471401 H3M14_RS05335 WP_112260852.1 1056875..1058152(+) (eeP) [Latilactobacillus sakei strain CBA3635]
MAAIIAFIIIFGILVVVHEFGHFYMAKRSGILVREFSVGMGPKLFATRKNGTTYTIRWLPLGGYVRMAGMADDESEIEAG
TQATLILDEQGRVQQINTSDKVTTLNGVPFQIAKTDLQKELWVEGYEGGDESEMKRYPVLHDATIIEEDGTEVQIAPVDV
QFQSATLINRMLTNFAGPFNNFILAILAFILFAFLSGGVPQQSNQIGTVQKNSAAQKAGLKANDRLLKVDNKKVASFTDF
SAIISEHPNETVAVRVQRGATEKIIKVTPKAVKVANQKEKVGQVGVTQKVKMDHSLKAKISYGFTQTWSIASQIFKILGS
FLTGGFSLDKLSGPVGMYSMTTQFTQQGFNALVYFLAFLSLNLGIMNLIPIPALDGGKLVLNIIEAIRRKPISPEKEGIV
TLIGVGIMVLLMVLVTWNDIQRFFF

Nucleotide


Download         Length: 1278 bp        

>NTDB_id=471401 H3M14_RS05335 WP_112260852.1 1056875..1058152(+) (eeP) [Latilactobacillus sakei strain CBA3635]
TTGGCTGCAATTATTGCGTTTATCATCATCTTTGGTATTTTAGTAGTCGTTCATGAATTTGGGCATTTTTACATGGCTAA
GCGCTCAGGCATTTTGGTGCGAGAGTTTTCTGTCGGCATGGGACCTAAATTATTTGCAACTCGCAAAAACGGCACAACTT
ACACCATCCGGTGGTTACCATTAGGTGGTTACGTTCGAATGGCGGGAATGGCCGACGATGAATCTGAAATTGAAGCTGGC
ACACAAGCGACTTTAATTTTGGACGAACAAGGACGCGTTCAACAGATTAATACAAGTGACAAGGTCACCACGTTAAACGG
GGTACCTTTCCAAATTGCTAAAACAGATTTACAAAAAGAATTGTGGGTCGAAGGTTACGAAGGCGGCGACGAGTCAGAAA
TGAAACGTTATCCCGTCTTACATGATGCGACGATTATCGAAGAAGACGGAACGGAAGTGCAAATCGCACCCGTGGATGTC
CAATTCCAATCAGCAACGTTGATTAATCGGATGTTAACGAACTTTGCCGGACCATTTAATAACTTCATCCTCGCAATTCT
AGCCTTTATCCTCTTCGCTTTTCTAAGCGGGGGTGTGCCACAGCAATCCAATCAAATTGGCACGGTACAAAAAAATTCTG
CTGCTCAAAAGGCAGGCTTAAAAGCCAACGATCGTCTTTTGAAGGTTGATAACAAAAAAGTAGCGAGCTTCACTGACTTT
AGTGCGATAATTTCAGAACACCCTAACGAAACTGTTGCGGTGCGCGTTCAACGGGGCGCAACTGAAAAGATAATCAAGGT
GACACCCAAGGCTGTCAAAGTGGCTAACCAAAAAGAAAAGGTTGGTCAAGTAGGGGTCACACAAAAAGTCAAAATGGACC
ATAGCCTAAAAGCCAAGATTTCTTACGGCTTTACGCAAACTTGGTCAATTGCCAGTCAGATTTTCAAGATCCTCGGGTCA
TTTTTAACCGGTGGGTTCTCACTAGATAAATTATCGGGGCCGGTCGGCATGTATTCAATGACGACCCAATTTACCCAACA
AGGCTTTAATGCGTTAGTTTATTTCTTAGCATTCTTATCACTTAATTTGGGGATTATGAATCTAATTCCGATTCCGGCGT
TAGATGGTGGTAAGTTAGTCTTGAACATTATTGAAGCGATTCGTCGCAAACCAATTTCACCTGAAAAAGAAGGCATCGTG
ACATTAATCGGTGTCGGTATTATGGTGTTATTAATGGTCTTAGTCACGTGGAATGATATACAACGATTTTTCTTTTAG

Domains

Predicted by InterproScan.

Peptidase family M50 (Peptidase_M50)

(6-411)

PDZ domain (PDZ_6)

(206-258)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

47.917

100

0.487
  eeP Streptococcus thermophilus LMG 18311

47.917

100

0.487