Detailed information    

insolico Bioinformatically predicted

Overview

Name   CJE1441   Type   Regulator
Locus tag   CMOL_RS05215 Genome accession   NZ_CP059597
Coordinates   1032618..1033268 (+) Length   216 a.a.
NCBI ID   WP_239819995.1    Uniprot ID   -
Organism   Campylobacter sp. RM10537     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context

Location: 1027618..1038268
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CMOL_RS05175 - 1028686..1028835 (+) 150 WP_239819987.1 hypothetical protein -
  CMOL_RS05180 (CMOL_1027) - 1028832..1029020 (-) 189 WP_239819988.1 hypothetical protein -
  CMOL_RS05185 (CMOL_1028) - 1029007..1029222 (-) 216 WP_239819989.1 hypothetical protein -
  CMOL_RS05190 (CMOL_1029) - 1029361..1030098 (+) 738 WP_239819990.1 S24 family peptidase -
  CMOL_RS05195 (CMOL_1030) - 1030113..1030865 (+) 753 WP_239819991.1 hypothetical protein -
  CMOL_RS05200 (CMOL_1031) - 1031168..1031548 (+) 381 WP_239819992.1 hypothetical protein -
  CMOL_RS05205 (CMOL_1032) - 1031545..1032168 (+) 624 WP_239819993.1 hypothetical protein -
  CMOL_RS05210 (CMOL_1033) - 1032184..1032618 (+) 435 WP_239819994.1 protein-export chaperone SecB -
  CMOL_RS05215 (CMOL_1034) CJE1441 1032618..1033268 (+) 651 WP_239819995.1 DNA/RNA non-specific endonuclease Regulator
  CMOL_RS05220 (CMOL_1035) - 1033258..1034091 (+) 834 WP_239819996.1 hypothetical protein -
  CMOL_RS05225 (CMOL_1036) - 1034092..1034883 (-) 792 WP_239819997.1 SEL1-like repeat protein -
  CMOL_RS05230 - 1034902..1035039 (-) 138 WP_239819998.1 hypothetical protein -
  CMOL_RS05235 (CMOL_1038) - 1035517..1035801 (+) 285 WP_239819999.1 hypothetical protein -
  CMOL_RS05240 (CMOL_1039) - 1036170..1036409 (+) 240 WP_239820000.1 hypothetical protein -
  CMOL_RS05245 (CMOL_1040) - 1036400..1036654 (+) 255 WP_239820001.1 hypothetical protein -
  CMOL_RS05250 (CMOL_1041) - 1036651..1036875 (+) 225 WP_239820002.1 helix-turn-helix domain-containing protein -
  CMOL_RS05255 (CMOL_1042) - 1036878..1037732 (+) 855 WP_239820003.1 lambda exonuclease family protein -

Sequence

Protein


Download         Length: 216 a.a.        Molecular weight: 25248.78 Da        Isoelectric Point: 9.9096

>NTDB_id=471195 CMOL_RS05215 WP_239819995.1 1032618..1033268(+) (CJE1441) [Campylobacter sp. RM10537]
MKKLTILSLLATLALANYIQYKPSEEFAKYFTTQSCSQVLDKFYYLNCYDYGYKGTKAVAYRLEADNLKGKQIKKRPRFE
DDTNIPKKYRTTWSDYKNSGYDRGHTLSNASMRKTTQAQRSTFLMSNITPQNPQINQRVWNKIEKRERQVALKLGSLEVL
NLVNYDSNPQRMKNNIAIPSSYIKILKGDNFKECYQVPNHEVENESIKSYKVDCDK

Nucleotide


Download         Length: 651 bp        

>NTDB_id=471195 CMOL_RS05215 WP_239819995.1 1032618..1033268(+) (CJE1441) [Campylobacter sp. RM10537]
ATGAAAAAACTTACAATCTTATCCTTACTAGCAACTCTAGCCTTAGCTAATTATATACAATATAAACCGAGCGAAGAGTT
TGCTAAGTATTTTACGACACAAAGTTGCTCACAAGTTTTAGATAAATTCTATTATCTAAATTGTTATGATTATGGTTATA
AAGGGACAAAAGCAGTAGCTTATAGATTAGAAGCTGATAATCTAAAAGGTAAACAAATTAAAAAACGTCCTCGTTTTGAA
GATGATACCAATATTCCTAAAAAATACCGCACTACTTGGAGCGATTATAAAAACAGTGGTTATGATAGAGGACATACTCT
TTCTAATGCTTCGATGAGAAAAACAACTCAAGCACAAAGAAGCACTTTTTTAATGAGCAATATCACTCCACAAAATCCAC
AAATCAATCAAAGAGTTTGGAACAAGATTGAAAAAAGAGAAAGACAAGTAGCTTTAAAGCTTGGGAGTTTAGAAGTTTTG
AATTTGGTTAATTATGATAGTAATCCACAAAGAATGAAAAACAATATAGCTATTCCAAGCTCTTATATTAAAATCTTAAA
AGGTGATAATTTTAAAGAATGTTATCAAGTGCCAAATCATGAAGTAGAAAATGAGAGTATAAAAAGTTACAAGGTTGATT
GTGATAAATAA

Domains

Predicted by InterproScan.

DNA/RNA non-specific endonuclease (Endonuclease_NS)

(24-215)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  CJE1441 Campylobacter jejuni RM1221

90.233

99.537

0.898
  CJE0566 Campylobacter jejuni RM1221

88.889

100

0.889