Detailed information NTG0047102

Bioinformatically predicted

Overview

• Name: comEC/comE3
• Type: Machinery gene
• Locus tag: KHP_RS00235
• Genome accession: NC_017382
• Coordinates: 48330..49643 (+)
• Length: 437 a.a.
• NCBI ID: WP_000653578.1
• Uniprot ID: -
• Organism: Helicobacter pylori 51
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 43330..54643

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KHP_RS00215 (KHP_0037)	crdR	43650..44291 (+)	642	WP_001169817.1	copper response regulator transcription factor CrdR	-
KHP_RS00220 (KHP_0038)	crdS	44257..45459 (+)	1203	WP_079988389.1	copper-sensing histidine kinase CrdS	-
KHP_RS00225 (KHP_0039)	-	45462..46856 (+)	1395	WP_000954079.1	bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase	-
KHP_RS00230 (KHP_0040)	-	46867..48333 (+)	1467	WP_000349966.1	replicative DNA helicase	-
KHP_RS00235 (KHP_0041)	comEC/comE3	48330..49643 (+)	1314	WP_000653578.1	ComEC/Rec2 family competence protein	Machinery gene
KHP_RS00240 (KHP_0042)	mqnP	49672..50556 (+)	885	WP_000913964.1	menaquinone biosynthesis prenyltransferase MqnP	-
KHP_RS00245 (KHP_0043)	-	50549..51043 (+)	495	WP_041201980.1	hypothetical protein	-
KHP_RS00250 (KHP_0044)	-	51056..51559 (+)	504	WP_000953083.1	DUF6115 domain-containing protein	-
KHP_RS00255 (KHP_0045)	-	51556..52359 (+)	804	WP_000968155.1	phosphatidylserine decarboxylase	-
KHP_RS00260 (KHP_0046)	nadA	52349..53359 (+)	1011	WP_001141818.1	quinolinate synthase NadA	-
KHP_RS00265 (KHP_0047)	nadC	53359..54180 (+)	822	WP_000404026.1	carboxylating nicotinate-nucleotide diphosphorylase	-

Sequence

Protein

• Length: 437 a.a.
• Molecular weight: 50082.94 Da
• Isoelectric Point: 9.7741

>NTDB_id=47102 KHP_RS00235 WP_000653578.1 48330..49643(+) (comEC/comE3) [Helicobacter pylori 51]
MKDKTFQGAFELLSTPKEYLVCGVFLSLLLAINLYLEYLNYQKLDFSKPTSLNAQILLQYPKTKDQKTYFVLKLQSKGMI
FYATIKEPLKNLQYRYAQFFGKIKPCSFLESLKSCFFQTYSFSLTRKQDFKSHWRHFIDSAHSSALVGNLYRALFIGDSL
NKDLRDRANALGINHLLAISGFHLGILSASVYFLFSLFYTPLQKRYFPYRNAFYDIGVLVWVFLLGYLLLLDFLPSFFRA
FLMGLLGFLACFFGVRLLSFKLLILACCIAIALLPKLLFSVGFLLSVCGVWYIFLFLKHTQAFFKTSSFLARSFQVISLS
ALIFLNMLIIAHAFFPMFSPYQLFSIPLGLIFIVFFPLSLFLHAVGLGSLLDSILNMPLTIPTISVFSPLWLLGAHLFLT
ILSAHFFKVYLSMNVLSAGFFLYCCYQYIIMPSLIVG

Nucleotide

• Length: 1314 bp

>NTDB_id=47102 KHP_RS00235 WP_000653578.1 48330..49643(+) (comEC/comE3) [Helicobacter pylori 51]
TTGAAAGACAAAACTTTTCAGGGGGCGTTTGAACTTCTTTCAACCCCCAAAGAATACCTGGTGTGTGGGGTGTTTTTAAG
CCTTTTGTTGGCAATTAATCTTTATTTAGAATACTTGAATTACCAAAAGCTTGATTTTTCAAAACCTACAAGCCTGAACG
CTCAAATCTTGTTGCAATACCCTAAAACTAAAGATCAAAAAACCTATTTTGTTTTAAAGCTCCAATCAAAGGGCATGATC
TTTTATGCCACCATTAAAGAGCCTTTAAAAAACCTCCAATACCGCTACGCGCAATTTTTTGGCAAAATCAAGCCCTGCTC
GTTCTTGGAGTCTCTAAAATCATGCTTTTTTCAAACTTATTCTTTTTCTTTAACGAGGAAACAAGATTTCAAATCGCATT
GGCGCCATTTCATTGATAGTGCTCATTCAAGCGCTTTAGTGGGGAATTTGTATCGCGCGTTATTTATAGGGGATAGCTTG
AATAAAGACTTAAGAGACAGGGCTAACGCGCTAGGGATCAACCACTTACTAGCCATTAGCGGGTTCCATTTAGGGATTTT
GAGCGCGAGCGTGTATTTTCTTTTCTCTCTTTTTTATACCCCCTTACAAAAACGCTATTTCCCTTATAGGAACGCTTTTT
ATGATATAGGGGTTTTGGTGTGGGTTTTTTTGCTGGGGTATTTATTGCTATTGGATTTTTTACCCTCTTTTTTCAGGGCG
TTTTTAATGGGCTTGTTAGGGTTTTTGGCATGCTTTTTTGGGGTAAGGCTTTTGAGTTTTAAACTTTTGATTTTAGCATG
CTGTATCGCTATAGCGTTACTCCCTAAATTGCTTTTTAGCGTGGGGTTTTTGCTTTCTGTTTGTGGGGTGTGGTATATCT
TTTTGTTTTTAAAACACACTCAAGCCTTTTTTAAAACCTCTTCTTTTTTGGCGCGATCTTTTCAGGTCATAAGCTTAAGC
GCACTAATTTTTTTGAACATGCTCATCATTGCGCATGCCTTTTTCCCTATGTTTTCGCCCTACCAGCTCTTTAGCATTCC
TTTAGGTTTGATTTTTATCGTGTTTTTCCCTTTGAGTTTGTTTTTGCATGCTGTGGGTTTGGGGTCTTTGCTAGATAGCA
TTTTAAACATGCCTTTAACAATCCCTACGATTTCGGTTTTTTCGCCTTTATGGCTTTTGGGGGCGCATTTATTTTTAACG
ATTCTAAGCGCGCATTTTTTTAAAGTTTATTTAAGCATGAATGTTTTGAGTGCGGGCTTTTTCTTGTATTGTTGCTATCA
ATATATTATAATGCCTAGTTTAATTGTAGGTTAG

Domains

Predicted by InterproScan.

• Competence protein (Competence) (159-391)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEC/comE3	Helicobacter pylori 26695	95.423	100	0.954