Detailed information    

insolico Bioinformatically predicted

Overview


Name   pptB   Type   Regulator
Locus tag   I6K87_RS05975 Genome accession   NZ_CP069892
Coordinates   1224969..1226015 (-) Length   348 a.a.
NCBI ID   WP_204982467.1    Uniprot ID   -
Organism   Streptococcus anginosus strain FDAARGOS_1357     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1219969..1231015
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6K87_RS05950 (I6K87_05950) nusA 1220084..1221277 (-) 1194 WP_003043633.1 transcription termination factor NusA -
  I6K87_RS05955 (I6K87_05955) rimP 1221326..1221814 (-) 489 WP_151380360.1 ribosome maturation factor RimP -
  I6K87_RS05960 (I6K87_05960) - 1222062..1222751 (-) 690 WP_204982845.1 VIT1/CCC1 transporter family protein -
  I6K87_RS05965 (I6K87_05965) trmB 1223489..1224124 (-) 636 WP_049533189.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  I6K87_RS05970 (I6K87_05970) ccrZ 1224121..1224918 (-) 798 WP_003043230.1 cell cycle regulator CcrZ -
  I6K87_RS05975 (I6K87_05975) pptB 1224969..1226015 (-) 1047 WP_204982467.1 ABC transporter permease Regulator
  I6K87_RS05980 (I6K87_05980) pptA 1226012..1226743 (-) 732 WP_049517074.1 ABC transporter ATP-binding protein Regulator
  I6K87_RS05985 (I6K87_05985) - 1226812..1227222 (+) 411 WP_204982468.1 HIT family protein -
  I6K87_RS05990 (I6K87_05990) - 1227232..1227519 (+) 288 WP_004224316.1 hypothetical protein -
  I6K87_RS05995 (I6K87_05995) brpA 1227566..1228681 (-) 1116 WP_204982469.1 biofilm formation/cell division transcriptional regulator BrpA -
  I6K87_RS06000 (I6K87_06000) - 1228688..1229209 (-) 522 WP_204982470.1 GNAT family N-acetyltransferase -
  I6K87_RS06005 (I6K87_06005) tsaE 1229202..1229642 (-) 441 WP_049533195.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -

Sequence


Protein


Download         Length: 348 a.a.        Molecular weight: 40800.04 Da        Isoelectric Point: 10.3095

>NTDB_id=471002 I6K87_RS05975 WP_204982467.1 1224969..1226015(-) (pptB) [Streptococcus anginosus strain FDAARGOS_1357]
MRELFQKRKQVFRNQCLKYSRYVFNDHFVLFLLVFTGFLAVQYSQLLRNLPSNHLPIILALVISLVLLLPLGRIATYMEK
PDSLFLLVKEEELKSYLQEQTHLSYRLWALLQTVALLLLAPLLLALGMPLWGWFILVFLMLLAKWFIFLQKSQKFYQGAG
VNWGYLIAYEERRKQTILRFFALFTNVKGISNSVKRRAYLDGLTNILPKRQSTTWQNMYLRSYLRNGDFLALTIRLLFLS
LLGIGFISQSWIAAIFVALLNYLLLFQLTALYHAFDYQYLTFLFPLEINSKLKGVKQVIVLIGYSVLFVETMMALLFFQD
RVALLFMIGITLLLYVIYLPFKLRSLVD

Nucleotide


Download         Length: 1047 bp        

>NTDB_id=471002 I6K87_RS05975 WP_204982467.1 1224969..1226015(-) (pptB) [Streptococcus anginosus strain FDAARGOS_1357]
ATGAGAGAACTGTTTCAAAAGCGCAAACAAGTATTTCGCAATCAATGTTTGAAGTATTCGCGCTATGTTTTTAACGACCA
TTTTGTCCTCTTTTTATTAGTTTTTACTGGCTTTTTAGCTGTTCAATACAGTCAGTTGTTGCGAAATTTACCTTCAAATC
ACCTGCCAATCATTCTTGCTTTAGTAATTTCTTTGGTTCTATTATTGCCTTTGGGGCGAATCGCGACTTATATGGAAAAA
CCAGATAGTTTATTTTTGTTAGTCAAAGAAGAGGAATTAAAAAGCTACCTACAAGAACAAACGCATTTATCTTATCGATT
ATGGGCCTTGCTTCAAACCGTTGCGTTGTTACTATTAGCACCGCTTCTTCTTGCTTTGGGCATGCCGCTTTGGGGCTGGT
TTATTCTTGTTTTTCTTATGTTGCTAGCAAAATGGTTTATCTTTTTGCAAAAAAGCCAGAAATTTTACCAAGGTGCAGGG
GTGAATTGGGGCTATCTCATTGCTTACGAAGAAAGACGAAAACAGACGATTCTGCGTTTCTTTGCTCTCTTTACCAATGT
TAAGGGAATTTCCAATAGCGTAAAACGCCGAGCATATCTTGATGGTTTGACGAATATTCTACCAAAAAGACAGTCAACTA
CTTGGCAAAATATGTATTTGCGTTCTTATTTGCGCAATGGTGATTTTCTTGCCTTGACTATACGGTTGCTGTTTCTGTCT
CTTTTGGGAATTGGTTTTATCAGTCAATCGTGGATTGCTGCCATATTTGTGGCATTGTTAAATTATCTCCTGCTATTTCA
GTTGACAGCCTTGTACCATGCCTTTGATTACCAATATTTGACGTTCTTATTCCCTTTAGAAATCAACTCAAAGTTAAAAG
GAGTGAAACAAGTGATTGTTCTTATTGGCTACAGCGTGCTTTTTGTGGAAACAATGATGGCTTTGCTGTTTTTCCAAGAT
AGAGTAGCTTTGCTTTTTATGATAGGAATCACATTGCTACTCTATGTCATTTATTTACCATTCAAATTAAGAAGTTTGGT
TGACTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptB Streptococcus thermophilus LMD-9

46.839

100

0.468

  pptB Streptococcus salivarius strain HSISS4

45.977

100

0.46