Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   H3L96_RS01160 Genome accession   NZ_CP059565
Coordinates   218617..219069 (+) Length   150 a.a.
NCBI ID   WP_009117461.1    Uniprot ID   G4CTB1
Organism   Neisseria wadsworthii strain DSM 22245     
Function   inhibition of RecA (predicted from homology)   
Competence regulation

Genomic Context

Location: 213617..224069
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H3L96_RS01135 (H3L96_01135) - 215027..215284 (+) 258 WP_009117456.1 hypothetical protein -
  H3L96_RS01140 (H3L96_01140) - 215464..216069 (+) 606 WP_040667176.1 glutathione S-transferase N-terminal domain-containing protein -
  H3L96_RS01145 (H3L96_01145) - 216170..216568 (+) 399 WP_009117458.1 ClpXP protease specificity-enhancing factor -
  H3L96_RS01150 (H3L96_01150) truB 216675..217595 (+) 921 WP_040667184.1 tRNA pseudouridine(55) synthase TruB -
  H3L96_RS01155 (H3L96_01155) - 217829..218542 (+) 714 WP_009117460.1 phosphoglycolate phosphatase -
  H3L96_RS01160 (H3L96_01160) recX 218617..219069 (+) 453 WP_009117461.1 recombination regulator RecX Regulator
  H3L96_RS01165 (H3L96_01165) pilQ 219119..221281 (-) 2163 WP_040667189.1 type IV pilus secretin PilQ family protein Machinery gene
  H3L96_RS01170 (H3L96_01170) - 221302..221838 (-) 537 WP_009117463.1 pilus assembly protein PilP -
  H3L96_RS01175 (H3L96_01175) pilO 221860..222504 (-) 645 WP_009117464.1 type 4a pilus biogenesis protein PilO -
  H3L96_RS01180 (H3L96_01180) - 222494..223117 (-) 624 WP_009117465.1 PilN domain-containing protein -

Sequence

Protein


Download         Length: 150 a.a.        Molecular weight: 17559.90 Da        Isoelectric Point: 10.0001

>NTDB_id=470688 H3L96_RS01160 WP_009117461.1 218617..219069(+) (recX) [Neisseria wadsworthii strain DSM 22245]
MSKKSLRARALDILSRREISRIELKRKLSPYAESEEEVEKVLNEFAERNWQSDQRFTESFIHSKSDRYGTRRLKQALAEK
GIDASTAQTFMPDHAKELATAKNVLRKKFKQPPADLADKYKHMRFLVYRGFDIDTINQAIKSAWGDEEHE

Nucleotide


Download         Length: 453 bp        

>NTDB_id=470688 H3L96_RS01160 WP_009117461.1 218617..219069(+) (recX) [Neisseria wadsworthii strain DSM 22245]
ATGTCAAAAAAATCCCTTCGCGCCCGAGCACTCGATATTCTCTCCCGCCGTGAAATCAGCCGAATTGAGCTTAAACGAAA
ACTTTCGCCCTATGCCGAAAGCGAAGAGGAAGTAGAAAAAGTGTTAAATGAATTTGCCGAGCGTAACTGGCAATCTGACC
AACGCTTTACCGAATCATTTATTCACAGCAAAAGCGATCGCTACGGCACACGAAGGTTGAAGCAGGCATTAGCAGAAAAA
GGCATTGATGCAAGTACAGCTCAAACCTTTATGCCTGATCATGCGAAAGAATTAGCAACCGCTAAAAACGTGCTACGCAA
AAAATTCAAACAACCTCCGGCAGATTTGGCTGATAAATACAAACATATGCGCTTCCTTGTTTACCGGGGCTTCGATATAG
ACACTATCAATCAAGCTATAAAGTCTGCATGGGGAGACGAAGAACATGAATAA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(34-142)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4CTB1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Neisseria gonorrhoeae strain FA1090

62.838

98.667

0.62