Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilS   Type   Regulator
Locus tag   H2677_RS14450 Genome accession   NZ_CP059558
Coordinates   3118040..3119605 (+) Length   521 a.a.
NCBI ID   WP_212638810.1    Uniprot ID   A0AAX1MGC9
Organism   Acinetobacter junii strain YR7     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3113040..3124605
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H2677_RS14425 (H2677_14420) thrC 3113684..3114823 (+) 1140 WP_002048893.1 threonine synthase -
  H2677_RS14430 (H2677_14425) - 3114890..3115669 (-) 780 WP_212638809.1 hypothetical protein -
  H2677_RS14435 (H2677_14430) - 3115693..3116028 (-) 336 Protein_2811 hypothetical protein -
  H2677_RS14440 (H2677_14435) pbpG 3116116..3117177 (-) 1062 WP_125297253.1 D-alanyl-D-alanine endopeptidase PBP7/8 -
  H2677_RS14445 (H2677_14440) - 3117389..3118024 (+) 636 WP_004957336.1 response regulator -
  H2677_RS14450 (H2677_14445) pilS 3118040..3119605 (+) 1566 WP_212638810.1 PAS domain-containing sensor histidine kinase Regulator
  H2677_RS14455 (H2677_14450) pilR 3119628..3121058 (+) 1431 WP_004917021.1 sigma-54 dependent transcriptional regulator Regulator
  H2677_RS14460 (H2677_14455) - 3121097..3122272 (-) 1176 WP_212638811.1 S41 family peptidase -
  H2677_RS14465 (H2677_14460) gpmI 3122282..3123826 (-) 1545 WP_004957318.1 2,3-bisphosphoglycerate-independent phosphoglycerate mutase -

Sequence

Protein


Download         Length: 521 a.a.        Molecular weight: 59143.17 Da        Isoelectric Point: 6.8197

>NTDB_id=470607 H2677_RS14450 WP_212638810.1 3118040..3119605(+) (pilS) [Acinetobacter junii strain YR7]
MLGKIASSVSQTVYKLGIWYSGYRLIISISLLLIYLLTAEQLASNYDYPFLYFYTLICFIAFSIFQLFLLKILPVQVTKQ
LILIFLIDVICLALITFSAGGPNLQLSLLYVIVIFSSAILLNSQLSLIVTLFAVIMVVYQRFIGDFFNYNNLNHLGNSAL
LAFLFFVVHAIGRIAVQRFKILETLTFHQSIEIHQLQNINRYILEQIEDGYLVLDESNHIVLSNPAANTLLGINVPVSTE
KTPLIKWQPDLFELIKFSELKDGEEFSFESQLSPYTVNVRVKHLIVPEQPLFLLILKDAQKLTQQVQQLKLAALGQLSAS
IAHEIRNPLAAIVQANELLKGSDIHQQDMLSRMISKQAKRIDSIIQDTLGMARNKPTEPQIIQLTEFFETLLNEDLADVK
SKIKLSLPENLAILFDEKQLRQVLINLIRNAIRHNAPEAEYIEVNIHLNDGRTRIDVIDFGTGVAKRDISQLFKPFFSTE
IKGTGLGLYLSHSFCEANHAKLNYIEQQQGACFRIECSKIH

Nucleotide


Download         Length: 1566 bp        

>NTDB_id=470607 H2677_RS14450 WP_212638810.1 3118040..3119605(+) (pilS) [Acinetobacter junii strain YR7]
ATGCTGGGCAAAATAGCCTCTTCCGTCTCCCAAACTGTCTATAAGCTTGGTATTTGGTACAGTGGATATCGGCTGATTAT
TTCTATCAGCCTTTTGCTCATTTATCTATTAACGGCTGAGCAATTAGCCTCCAATTATGATTACCCTTTTTTATATTTCT
ATACACTGATTTGCTTTATTGCATTTAGTATTTTCCAGCTTTTTTTACTCAAAATACTTCCAGTACAAGTCACCAAACAG
CTCATTTTAATTTTTCTTATTGATGTGATTTGTTTAGCGCTGATTACTTTCTCTGCAGGGGGACCAAATTTACAATTAAG
TTTGTTATACGTAATCGTAATCTTTTCTTCTGCAATTCTATTAAACTCTCAGCTCTCGCTGATCGTGACACTTTTTGCTG
TCATTATGGTGGTTTATCAACGTTTTATTGGTGATTTCTTTAACTACAATAACTTAAATCATCTCGGAAACAGTGCCTTA
CTGGCATTTCTATTCTTTGTTGTGCATGCGATTGGACGTATTGCAGTACAACGTTTTAAAATTTTAGAGACATTGACATT
CCATCAATCCATAGAGATTCATCAACTTCAAAATATTAACCGCTACATCCTTGAACAGATTGAAGATGGTTATCTCGTTC
TAGATGAAAGTAATCATATTGTTTTAAGCAATCCTGCTGCCAATACTTTACTTGGAATTAACGTTCCTGTTTCTACTGAG
AAAACACCTTTAATAAAATGGCAACCCGATCTTTTTGAGCTGATCAAATTTAGTGAGCTAAAAGATGGTGAGGAATTTAG
TTTTGAATCACAACTTAGCCCATACACGGTCAATGTTAGAGTCAAACATTTAATTGTTCCTGAACAGCCCTTATTCTTAT
TGATCCTGAAAGATGCCCAAAAACTTACTCAACAGGTTCAACAATTAAAATTGGCAGCTTTAGGACAACTTTCTGCAAGT
ATTGCACACGAAATCAGAAACCCACTTGCAGCTATTGTACAAGCCAATGAATTACTTAAGGGTAGCGATATCCATCAGCA
AGACATGCTATCTCGAATGATTAGCAAACAGGCAAAAAGGATCGATAGCATCATTCAAGATACTTTGGGGATGGCACGCA
ATAAACCTACTGAACCACAAATTATTCAATTAACAGAATTTTTTGAAACATTATTAAATGAAGATTTAGCAGATGTTAAA
TCTAAGATCAAACTCAGTTTGCCTGAAAATTTAGCAATTCTGTTTGATGAAAAACAATTAAGACAAGTGTTAATCAATCT
TATTCGTAATGCTATAAGACACAATGCACCTGAAGCAGAATATATTGAAGTGAATATTCATCTAAATGATGGTCGCACCC
GAATAGATGTGATTGATTTTGGTACAGGCGTTGCAAAAAGAGATATTTCTCAGTTATTCAAACCATTTTTTAGTACCGAA
ATTAAAGGAACTGGTTTAGGATTGTACTTGTCTCATAGTTTTTGTGAGGCAAATCATGCAAAGCTCAATTATATAGAGCA
ACAACAAGGAGCATGTTTCAGGATTGAATGCTCAAAAATTCATTGA

Domains

Predicted by InterproScan.

His Kinase A (phospho-acceptor) domain (HisKA)

(313-374)

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(416-516)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilS Acinetobacter baumannii strain A118

66.085

99.04

0.655