Detailed information    

insolico Bioinformatically predicted

Overview


Name   chpA   Type   Regulator
Locus tag   H2789_RS03230 Genome accession   NZ_CP059549
Coordinates   658013..662518 (+) Length   1501 a.a.
NCBI ID   WP_347019541.1    Uniprot ID   -
Organism   Acinetobacter calcoaceticus strain NCIMB13260     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context


Location: 653013..667518
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H2789_RS03205 (H2789_03195) - 653451..654089 (-) 639 WP_347019539.1 hypothetical protein -
  H2789_RS03210 (H2789_03200) pilG 654375..654758 (+) 384 WP_000389061.1 twitching motility response regulator PilG Regulator
  H2789_RS03215 (H2789_03205) - 654782..655144 (+) 363 WP_005036319.1 response regulator -
  H2789_RS03220 (H2789_03210) - 655204..655740 (+) 537 WP_005309806.1 chemotaxis protein CheW -
  H2789_RS03225 (H2789_03215) - 655783..657864 (+) 2082 WP_347019540.1 methyl-accepting chemotaxis protein -
  H2789_RS03230 (H2789_03220) chpA 658013..662518 (+) 4506 WP_347019541.1 Hpt domain-containing protein Regulator
  H2789_RS03235 (H2789_03225) - 662518..662985 (+) 468 WP_003655293.1 hypothetical protein -
  H2789_RS03240 (H2789_03230) dapE 663021..664157 (-) 1137 WP_056483376.1 succinyl-diaminopimelate desuccinylase -
  H2789_RS03245 (H2789_03235) - 664283..664426 (-) 144 WP_003655297.1 entericidin A/B family lipoprotein -
  H2789_RS03250 (H2789_03240) - 664549..665430 (-) 882 WP_347019542.1 DUF1853 family protein -
  H2789_RS03255 (H2789_03245) - 665535..665903 (+) 369 WP_347019543.1 YbaN family protein -
  H2789_RS03260 (H2789_03250) elsL 666115..666618 (+) 504 WP_347019544.1 cell wall-recycling L,D-carboxypeptidase ElsL -

Sequence


Protein


Download         Length: 1501 a.a.        Molecular weight: 171532.85 Da        Isoelectric Point: 4.4423

>NTDB_id=470492 H2789_RS03230 WP_347019541.1 658013..662518(+) (chpA) [Acinetobacter calcoaceticus strain NCIMB13260]
MKEILKTLTEAMMLPEDSYSQQDAEFLDIFVEEIEEIFVELQSLIHEWMQSKNVATLTEIRRHFHTLKGSGRMIAAKSSA
ELAWTVEDTLNRVINESLTLTPNIQQYVQLVFKFYFFKLVDDFKSKKEHAVDFRPLILLGQQLQQQQSLEPALEELLLLS
DTLTAETKTGLEVGDLEQESDNLTLETAIESEHNLAETLVLFMEEAEEHLATIDQFLEQEIHQHESYNALIRALHTLRGS
SAMAQVEAIFDASTKVEHLFKILLQEELSSHSEEILLLRDYRQFIRNCLDLLAAHCSNEQLDSNLKQFNQVWDVYMEQHG
EHASPLTPPHGLVSQLLQLDVSELLDAELDFEKGIRSEFPHYLERLSEQADLLLQHTQSQAMVGLYEYTNQLKDSYDVLL
DRPDLLHSDYVFEIYQKAHQQLIQLFDALAAGQRVSIIEQHQNILEELKLYTQYIPSLNSEPLESHQEVVESLFSVDLEQ
TANESSASIESVLTDHVVMSQSVHLDRQFMSTEHVNRYFDPELLDIFLEEADELLEGMDTDLNIWVNDQENFAALNNLMR
YLHTLKGGANMIQANYIGLIAHELESIYERLIQRQLITSSALIDFIRLVQDDLADRLQIVREQHLDYAASHTIQALKNAG
KVYNSLGSAAKEMQAESETDVIPESSVEVLQQEAIHNTALNLDELTSNFEQIVESNNRLVEYTELQVFDAEGYTDSIQDQ
DIDSVVEQTFMEEAAELLEMADHLLKQWFEQRTNRSILLQLQRAVHSLKGGSRMVGLETVQAIAYQLENAFEKFALYHFS
SNIYDNLLESAIVWLKEAIFKQNYQHFDGLQQSLENIQFIETAIQIPSKLTRTDLFSTEPVMSFVQGDGAEPPPMMGAWE
QTQHLEQNNEMIRVSADLIEKMIDLSGENSINRSRIEMDLSQFGHTLVEMELAIQRLADQLRRMEGELESQIIAKHGIEH
SRYTEFDPLEMDQYSSLNQLSKSLAESASDLVDFKNTLSEKIRDTESLLVQQSRIQAEIQEGLMRTRLVPFSRLLPRLQR
IVRQTSTALDRPAELFVNNTEGELDRTMLERLVTPLEHMLRNAIDHGLEDRVQREQARKPETGRIELNIHRQGTDVVVTF
KDDGRGIDIEKVRQKALLSGLINPEQVLEHQDILQLIFHPGLSTADQVTQISGRGVGLDVVQSDIKALGGHVSVDSVYGQ
GTIFTIRVPTTVAVSDALMVKVADQQFAIPLAQIDRIVRVSPTSLEQYFGSAQEFFEFENKRYPLRYLSEFVGNQPIPRL
SGMMYSLPVLMIKTNNGQTIALLVDQLIGSRAQIVVKPIGQQFSSIGAIAGATILGDGQVCLILDGQNIARQIQSTRRHK
QLNEAIYRQRESDERRLIMIVDDSVTVRKVTTRLLERQGYDVVTAKDGIDAIEQLENIKPDLMLLDIEMPRMDGFEVLNL
VRHHDLHQDMPVIMITSRTGEKHRERAFTLGVNQYMGKPFQEEDLLHNIDAFFTTREEELA

Nucleotide


Download         Length: 4506 bp        

>NTDB_id=470492 H2789_RS03230 WP_347019541.1 658013..662518(+) (chpA) [Acinetobacter calcoaceticus strain NCIMB13260]
ATGAAAGAAATATTAAAAACTTTAACTGAAGCAATGATGCTACCGGAAGATAGCTATTCTCAACAAGATGCTGAATTTCT
TGATATCTTCGTTGAAGAAATTGAAGAAATTTTTGTTGAATTGCAATCTTTGATTCATGAATGGATGCAATCTAAAAATG
TTGCTACGCTGACTGAGATCCGTCGCCATTTTCATACCTTGAAAGGTTCGGGGCGAATGATTGCAGCGAAATCCTCTGCT
GAGCTTGCTTGGACTGTAGAAGATACGCTTAATCGGGTAATCAATGAGAGTCTCACATTAACTCCTAACATCCAACAATA
TGTTCAGTTGGTATTTAAGTTCTATTTCTTTAAATTAGTAGATGACTTTAAATCTAAAAAGGAACATGCAGTAGATTTTA
GACCTCTTATTTTATTGGGACAACAATTACAACAACAGCAAAGTCTAGAGCCTGCTTTAGAAGAACTTTTATTATTGTCG
GATACTCTCACTGCGGAAACTAAGACTGGTTTAGAGGTGGGTGATTTAGAACAGGAATCAGATAATTTAACTCTAGAAAC
CGCCATAGAAAGTGAACATAACCTTGCTGAAACCTTAGTTTTATTTATGGAAGAAGCGGAAGAACACTTAGCGACCATCG
ATCAGTTCTTAGAACAAGAAATACATCAGCACGAGAGTTACAATGCGCTAATCCGTGCATTACATACGTTGCGCGGCAGC
TCAGCAATGGCTCAGGTAGAAGCAATTTTTGATGCCAGTACCAAGGTTGAGCATTTATTTAAAATCCTATTACAAGAAGA
GCTATCTTCTCATTCAGAAGAAATTTTACTACTCCGTGATTACCGTCAGTTTATTCGAAATTGTTTAGATCTATTGGCTG
CGCATTGTTCTAATGAGCAATTAGACTCTAACCTGAAACAGTTCAATCAGGTTTGGGATGTTTATATGGAACAACATGGG
GAGCATGCGAGCCCGCTCACGCCTCCACATGGTTTAGTATCTCAGCTGTTACAGCTAGATGTTTCAGAATTACTTGATGC
AGAGTTAGATTTTGAGAAAGGAATTCGTTCTGAGTTTCCTCATTATCTTGAACGTTTAAGTGAACAAGCTGATTTGTTAT
TGCAACATACTCAGTCGCAGGCCATGGTTGGTTTATATGAATATACGAACCAGCTGAAAGATAGCTATGACGTATTGCTT
GATCGACCTGATTTATTACACTCAGATTATGTTTTTGAAATTTATCAGAAAGCACATCAACAATTAATTCAGTTATTTGA
TGCATTAGCTGCGGGTCAAAGAGTTAGTATTATTGAGCAACACCAAAATATTTTGGAAGAGCTAAAACTATATACTCAAT
ATATTCCAAGCCTTAATTCTGAACCATTAGAAAGTCATCAGGAAGTTGTTGAGTCACTATTTAGTGTTGATCTAGAACAA
ACAGCAAATGAATCTTCAGCATCTATCGAAAGTGTATTAACTGATCATGTAGTCATGAGTCAGAGTGTGCATTTAGATCG
CCAGTTCATGTCTACTGAGCACGTAAACCGTTATTTTGATCCAGAACTGTTAGATATTTTTCTTGAAGAAGCCGATGAGT
TACTTGAAGGAATGGATACAGATCTTAATATTTGGGTTAATGATCAAGAGAACTTTGCTGCTCTTAATAATCTGATGCGC
TATTTGCATACCTTAAAAGGTGGGGCAAATATGATTCAGGCAAATTATATTGGTTTAATTGCACATGAACTAGAAAGTAT
TTATGAGCGCTTAATTCAAAGACAGTTAATTACTTCATCTGCTCTCATTGATTTTATCCGTCTGGTCCAAGATGATTTAG
CTGATCGCCTACAAATAGTACGTGAACAGCACCTAGATTATGCTGCTTCTCATACTATTCAAGCGCTTAAGAATGCAGGT
AAGGTATATAATTCACTCGGGTCTGCTGCTAAAGAGATGCAAGCAGAGTCTGAAACAGATGTTATACCGGAATCAAGTGT
TGAAGTATTACAACAAGAAGCTATACACAATACTGCGTTAAATCTCGATGAGTTAACTTCTAATTTTGAGCAGATTGTTG
AGTCTAATAATAGACTTGTTGAGTACACAGAATTACAAGTTTTTGATGCAGAAGGCTATACAGACAGTATCCAAGATCAG
GATATTGACTCTGTTGTCGAGCAGACATTTATGGAGGAAGCGGCCGAGCTGTTAGAGATGGCCGATCACCTATTAAAGCA
GTGGTTTGAGCAGCGTACCAATCGTAGTATCTTGCTTCAGCTACAAAGGGCTGTGCACAGCTTGAAAGGTGGTTCCCGTA
TGGTGGGACTTGAAACCGTACAAGCGATTGCTTATCAACTTGAAAACGCTTTTGAAAAATTTGCGCTTTATCATTTTAGC
TCAAATATTTATGACAACTTGCTAGAGAGTGCGATTGTTTGGTTAAAAGAAGCAATTTTTAAACAAAATTATCAACATTT
TGATGGTTTACAACAAAGTTTAGAAAATATTCAGTTTATTGAAACTGCAATACAAATTCCAAGTAAGTTGACCAGAACTG
ATCTATTTAGCACTGAACCTGTAATGAGCTTTGTGCAAGGTGATGGGGCAGAACCACCGCCAATGATGGGGGCATGGGAA
CAAACGCAGCATCTTGAACAAAATAATGAGATGATCCGGGTTTCGGCAGATTTAATTGAGAAAATGATTGATTTGTCTGG
TGAAAATTCGATTAACCGTTCACGAATTGAAATGGATCTCAGTCAATTTGGTCATACCCTAGTGGAAATGGAATTAGCCA
TTCAACGACTAGCAGACCAGTTACGTCGAATGGAAGGCGAATTAGAAAGTCAGATTATTGCAAAACACGGTATTGAGCAC
TCTCGTTATACAGAATTTGATCCTCTAGAGATGGACCAATATTCTTCATTGAATCAATTATCGAAATCACTTGCCGAATC
TGCGTCGGATTTAGTGGATTTTAAAAATACATTATCTGAAAAAATCAGAGACACTGAAAGTTTGCTGGTACAACAGTCAC
GTATTCAGGCCGAAATTCAAGAAGGCCTAATGCGAACACGATTAGTACCATTTTCTCGATTGCTACCTCGTTTACAAAGA
ATTGTGAGGCAGACTTCTACTGCATTGGATCGACCAGCAGAGCTTTTTGTTAATAATACCGAAGGTGAATTAGACCGGAC
AATGCTAGAACGTTTGGTTACACCACTTGAGCACATGCTTCGAAATGCAATTGACCATGGTTTAGAAGATCGTGTGCAAC
GTGAACAAGCGCGAAAACCAGAAACTGGACGTATTGAACTGAATATTCATCGTCAAGGTACAGATGTTGTTGTTACATTT
AAGGATGATGGCCGAGGTATTGATATCGAGAAGGTCCGTCAAAAGGCCCTATTGTCTGGTTTGATTAATCCTGAACAAGT
ATTAGAACATCAAGATATTTTACAGTTGATTTTCCATCCAGGGTTAAGTACGGCCGATCAAGTCACTCAGATTTCAGGTC
GTGGTGTAGGACTAGATGTTGTACAAAGTGATATTAAAGCTTTGGGCGGACATGTGAGTGTGGACTCTGTGTATGGGCAA
GGAACAATCTTTACAATACGCGTTCCGACCACAGTAGCTGTTAGTGATGCCTTAATGGTTAAAGTTGCTGATCAACAATT
TGCAATTCCTTTGGCTCAAATTGATCGAATTGTTCGAGTTTCACCAACATCATTAGAGCAGTATTTTGGAAGTGCACAAG
AATTCTTTGAATTTGAAAATAAACGCTATCCATTACGTTATTTATCTGAGTTTGTTGGTAATCAACCGATTCCACGTTTA
AGCGGGATGATGTATTCACTACCAGTATTAATGATTAAGACCAATAATGGACAAACAATTGCATTATTGGTTGATCAGCT
TATTGGTTCACGTGCGCAGATTGTGGTCAAGCCAATCGGGCAGCAGTTCTCTAGTATTGGTGCGATTGCAGGCGCAACTA
TTTTAGGTGATGGTCAAGTTTGTCTAATTTTAGATGGACAAAATATTGCTCGCCAAATTCAGTCTACCCGCCGACATAAG
CAGCTTAATGAAGCTATCTATAGACAACGTGAGTCTGATGAACGCCGTCTCATTATGATTGTAGATGACTCTGTCACAGT
CCGTAAGGTAACTACTCGTTTACTCGAACGTCAGGGCTATGACGTAGTCACTGCTAAAGATGGTATCGATGCAATTGAGC
AGTTGGAAAATATTAAACCAGATCTGATGCTGCTTGATATCGAAATGCCGCGAATGGATGGCTTTGAAGTACTGAACCTC
GTACGACATCATGATCTACATCAAGATATGCCAGTCATTATGATTACATCCAGAACTGGCGAAAAACACCGTGAACGAGC
ATTTACTTTAGGGGTTAACCAATACATGGGTAAACCTTTCCAAGAAGAAGACCTACTTCACAATATTGATGCTTTTTTCA
CGACACGTGAAGAGGAACTTGCCTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  chpA Acinetobacter baumannii strain A118

79.457

100

0.799