Detailed information NTG0047035

Bioinformatically predicted

Overview

• Name: comH
• Type: Machinery gene
• Locus tag: HPSNT_RS07365
• Genome accession: NC_017376
• Coordinates: 1532627..1534069 (-)
• Length: 480 a.a.
• NCBI ID: WP_000751642.1
• Uniprot ID: G2MCL7
• Organism: Helicobacter pylori SNT49
• Function: import of DNA into the periplasm (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1527627..1539069

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HPSNT_RS07340 (HPSNT_07545)	recG	1528759..1530630 (-)	1872	WP_001158362.1	ATP-dependent DNA helicase RecG	-
HPSNT_RS07345 (HPSNT_07550)	-	1530712..1531059 (+)	348	WP_000837037.1	hypothetical protein	-
HPSNT_RS07350 (HPSNT_07555)	-	1531063..1531698 (+)	636	WP_000668024.1	outer membrane protein	-
HPSNT_RS07355 (HPSNT_07560)	-	1531695..1532447 (-)	753	WP_000780318.1	exodeoxyribonuclease III	-
HPSNT_RS07365 (HPSNT_07565)	comH	1532627..1534069 (-)	1443	WP_000751642.1	hypothetical protein	Machinery gene
HPSNT_RS07375 (HPSNT_07570)	dnaA	1534298..1535665 (-)	1368	WP_000380564.1	chromosomal replication initiator protein DnaA	-
HPSNT_RS07380 (HPSNT_07575)	-	1535817..1536359 (+)	543	WP_000922956.1	hypothetical protein	-
HPSNT_RS07385 (HPSNT_07580)	-	1536395..1536634 (+)	240	WP_000461837.1	DUF2443 domain-containing protein	-
HPSNT_RS07390 (HPSNT_07585)	glmS	1536635..1538428 (+)	1794	WP_000334426.1	glutamine--fructose-6-phosphate transaminase (isomerizing)	-

Sequence

Protein

• Length: 480 a.a.
• Molecular weight: 55095.13 Da
• Isoelectric Point: 7.2669

>NTDB_id=47035 HPSNT_RS07365 WP_000751642.1 1532627..1534069(-) (comH) [Helicobacter pylori SNT49]
MKKTLCLSFFLTFSNPLQALVIELLEEIKTSPHKGTFKAKVLDSKEPKQVLGVYNISPHKKLTLTITHISTAIVYQPLDE
KLSLETTLNPNRPTIPRNTQIVFSSKELKESHPHQMPSLNAPMQKPQNKPHSSQQPPQNFSYPEPKLGSKNSKNSLLQPL
ITPSKTSPTNEVKTPTNDTKPPLKHSSEDQENNLFIAPPTEKTLPNNTPNTDISENNESHENNRDNVEKQAIRDPNIKEF
ACGKWVYDDENLQAYRPSILKRVDEDKQTATDITPCDYSHAENKSGKITTPYTKISVHKTEPLEEPQTFEAKNNFTILQA
RSSTEKCKRARARKDGTIRQCYLIEEPLKQAWESEYQITTQLVKAVYERPKQDDQVEPTFYETSELAYSSTRKSEVTRNE
LNLNEKFMEFVEVYEGHYLNDIVKESSEYKEWVKNHVRFKEGVCMVLEIEEQPRAKSTPLSIENSRVVCVKKGNYLFNEV

Nucleotide

• Length: 1443 bp

>NTDB_id=47035 HPSNT_RS07365 WP_000751642.1 1532627..1534069(-) (comH) [Helicobacter pylori SNT49]
ATGAAAAAAACCCTTTGTCTGTCTTTCTTTCTGACTTTCTCTAACCCTCTTCAAGCCCTTGTGATCGAGCTTTTAGAAGA
AATCAAAACTTCGCCGCATAAAGGCACTTTTAAGGCTAAAGTCCTTGATTCTAAAGAACCAAAACAAGTTTTAGGCGTTT
ATAATATCTCCCCACACAAAAAACTCACGCTCACTATCACCCACATATCCACCGCAATTGTCTATCAACCCCTTGATGAA
AAACTTTCTTTAGAAACGACCTTAAACCCTAACCGCCCTACTATCCCTAGAAACACCCAGATTGTTTTTTCTTCAAAAGA
ATTGAAAGAGTCGCATCCGCACCAAATGCCTTCTTTAAACGCACCCATGCAAAAACCCCAAAATAAGCCCCATTCATCGC
AACAACCTCCTCAAAACTTTTCTTACCCAGAGCCCAAACTAGGCTCTAAAAACTCTAAAAACAGCCTTTTACAGCCTTTA
ATAACTCCTAGCAAAACAAGCCCCACTAATGAAGTTAAAACGCCAACAAACGACACTAAACCCCCTTTAAAGCATTCTTC
AGAAGATCAAGAAAACAATCTCTTCATAGCGCCACCCACTGAAAAAACGCTCCCTAACAACACCCCTAACACTGATATTA
GTGAAAACAATGAAAGCCATGAGAATAATAGGGATAATGTGGAAAAACAAGCCATTAGAGATCCCAATATTAAAGAATTT
GCGTGCGGGAAGTGGGTCTATGACGATGAAAATTTACAAGCTTACCGCCCAAGCATTTTAAAACGCGTTGATGAAGACAA
ACAGACTGCGACAGACATCACCCCTTGCGATTACAGCCACGCTGAAAATAAAAGCGGTAAAATCACTACCCCTTATACTA
AAATCTCTGTTCATAAAACAGAGCCTTTAGAAGAGCCACAAACTTTTGAAGCTAAAAACAATTTTACAATTCTTCAAGCC
AGAAGCTCTACAGAAAAATGCAAAAGGGCCAGAGCGCGAAAAGACGGCACGATTAGGCAATGCTATCTCATAGAAGAGCC
TTTAAAACAAGCGTGGGAGAGTGAGTATCAAATCACCACGCAATTAGTGAAAGCTGTATATGAACGCCCCAAACAAGACG
ATCAAGTAGAGCCGACTTTCTATGAAACCAGCGAATTGGCTTATTCTTCCACACGAAAAAGCGAAGTAACGCGCAATGAA
TTGAATTTGAATGAAAAGTTCATGGAATTTGTGGAAGTGTATGAAGGGCATTATTTAAACGATATAGTCAAAGAAAGCAG
TGAATACAAAGAATGGGTTAAAAACCATGTGCGCTTTAAAGAAGGAGTGTGCATGGTTTTAGAAATAGAAGAACAACCAC
GAGCCAAAAGCACGCCTTTGAGCATTGAAAACTCTCGTGTTGTGTGTGTCAAAAAGGGGAATTATTTATTCAACGAAGTT
TGA

Domains

No domain identified.

3D structure

• AlphaFold DB: G2MCL7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comH	Helicobacter pylori 26695	94.375	100	0.944