Detailed information
Bioinformatically predicted
Overview
| Name | dprB | Type | Machinery gene |
| Locus tag | HPSNT_RS01820 | Genome accession | NC_017376 |
| Coordinates | 373852..374256 (+) | Length | 134 a.a. |
| NCBI ID | WP_000599261.1 | Uniprot ID | G2MBH6 |
| Organism | Helicobacter pylori SNT49 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 368852..379256
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HPSNT_RS01785 (HPSNT_01820) | - | 369021..369959 (-) | 939 | WP_000833979.1 | tetraacyldisaccharide 4'-kinase | - |
| HPSNT_RS01790 (HPSNT_01825) | - | 369956..370738 (-) | 783 | WP_001168319.1 | NAD+ synthase | - |
| HPSNT_RS01800 (HPSNT_01830) | ilvC | 370996..371988 (+) | 993 | WP_001207574.1 | ketol-acid reductoisomerase | - |
| HPSNT_RS01805 (HPSNT_01835) | minD | 372012..372818 (+) | 807 | WP_001019089.1 | septum site-determining protein MinD | - |
| HPSNT_RS01810 (HPSNT_01840) | minE | 372815..373048 (+) | 234 | WP_000051425.1 | cell division topological specificity factor MinE | - |
| HPSNT_RS01815 (HPSNT_01845) | dprA | 373055..373855 (+) | 801 | WP_000841123.1 | DNA-processing protein DprA | Machinery gene |
| HPSNT_RS01820 (HPSNT_01850) | dprB | 373852..374256 (+) | 405 | WP_000599261.1 | Holliday junction resolvase RuvX | Machinery gene |
| HPSNT_RS08535 (HPSNT_01855) | - | 374389..374541 (+) | 153 | WP_014536683.1 | tetratricopeptide repeat protein | - |
| HPSNT_RS01830 (HPSNT_01860) | - | 374664..374969 (+) | 306 | WP_000699930.1 | hypothetical protein | - |
| HPSNT_RS01835 (HPSNT_01865) | - | 374953..375519 (+) | 567 | WP_000032372.1 | hypothetical protein | - |
| HPSNT_RS01840 (HPSNT_01870) | - | 375603..376484 (-) | 882 | WP_001117119.1 | RluA family pseudouridine synthase | - |
| HPSNT_RS01845 (HPSNT_01875) | recJ | 376484..378034 (-) | 1551 | WP_000810807.1 | single-stranded-DNA-specific exonuclease RecJ | - |
Sequence
Protein
Download Length: 134 a.a. Molecular weight: 15434.99 Da Isoelectric Point: 9.9308
>NTDB_id=47027 HPSNT_RS01820 WP_000599261.1 373852..374256(+) (dprB) [Helicobacter pylori SNT49]
MILACDVGLKRIGIAVLLNGVILPLEAILRRNRNQASKDLSDLLREKNIQVLVVGKPNESYTDTNARIEHFIKLVDFKGE
IVFINEDRSSIETYENLEHLSKKNKRLAIKDGRLDSLSACRILERYYQQVLKKR
MILACDVGLKRIGIAVLLNGVILPLEAILRRNRNQASKDLSDLLREKNIQVLVVGKPNESYTDTNARIEHFIKLVDFKGE
IVFINEDRSSIETYENLEHLSKKNKRLAIKDGRLDSLSACRILERYYQQVLKKR
Nucleotide
Download Length: 405 bp
>NTDB_id=47027 HPSNT_RS01820 WP_000599261.1 373852..374256(+) (dprB) [Helicobacter pylori SNT49]
GTGATTTTGGCATGCGATGTGGGGTTAAAACGCATTGGAATCGCTGTGCTTTTAAACGGCGTTATTTTGCCATTAGAAGC
GATTTTACGCCGCAACAGGAATCAGGCCTCTAAGGATTTGAGCGATTTGTTGAGGGAAAAAAACATTCAAGTGCTAGTGG
TGGGCAAGCCCAATGAAAGCTATACGGATACGAACGCACGCATTGAGCATTTTATCAAGCTTGTGGATTTTAAGGGCGAA
ATCGTTTTTATTAATGAAGACAGATCCAGCATAGAAACCTATGAAAATTTAGAGCATTTGAGTAAGAAAAACAAGCGGCT
TGCTATCAAAGACGGCCGGTTAGACTCTTTGAGCGCTTGCAGGATTTTAGAACGCTATTATCAGCAGGTTTTAAAAAAGC
GCTAG
GTGATTTTGGCATGCGATGTGGGGTTAAAACGCATTGGAATCGCTGTGCTTTTAAACGGCGTTATTTTGCCATTAGAAGC
GATTTTACGCCGCAACAGGAATCAGGCCTCTAAGGATTTGAGCGATTTGTTGAGGGAAAAAAACATTCAAGTGCTAGTGG
TGGGCAAGCCCAATGAAAGCTATACGGATACGAACGCACGCATTGAGCATTTTATCAAGCTTGTGGATTTTAAGGGCGAA
ATCGTTTTTATTAATGAAGACAGATCCAGCATAGAAACCTATGAAAATTTAGAGCATTTGAGTAAGAAAAACAAGCGGCT
TGCTATCAAAGACGGCCGGTTAGACTCTTTGAGCGCTTGCAGGATTTTAGAACGCTATTATCAGCAGGTTTTAAAAAAGC
GCTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| dprB | Helicobacter pylori 26695 |
93.182 |
98.507 |
0.918 |