Detailed information NTG0470182

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: H2N97_RS01930
• Genome accession: NZ_CP059497
• Coordinates: 390123..391271 (+)
• Length: 382 a.a.
• NCBI ID: WP_003156336.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain JSRB 08
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 385123..396271

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H2N97_RS01910 (H2N97_01910)	-	385523..386206 (-)	684	WP_014416899.1	ABC transporter ATP-binding protein	-
H2N97_RS01915 (H2N97_01915)	-	386221..387654 (-)	1434	WP_134986377.1	ABC transporter permease	-
H2N97_RS01920 (H2N97_01920)	-	387867..388550 (+)	684	WP_014416901.1	response regulator transcription factor	-
H2N97_RS01925 (H2N97_01925)	-	388537..389970 (+)	1434	WP_134986378.1	HAMP domain-containing sensor histidine kinase	-
H2N97_RS01930 (H2N97_01930)	rapC	390123..391271 (+)	1149	WP_003156336.1	Rap family tetratricopeptide repeat protein	Regulator
H2N97_RS01935 (H2N97_01935)	phrC	391255..391374 (+)	120	WP_003156334.1	PhrC/PhrF family phosphatase-inhibitory pheromone	Regulator
H2N97_RS01940 (H2N97_01940)	-	391524..391634 (-)	111	WP_369719092.1	YjcZ family sporulation protein	-
H2N97_RS01945 (H2N97_01945)	-	391714..393078 (-)	1365	WP_053285479.1	aspartate kinase	-
H2N97_RS01950 (H2N97_01950)	ceuB	393491..394444 (+)	954	WP_014416904.1	ABC transporter permease	Machinery gene
H2N97_RS01955 (H2N97_01955)	-	394434..395381 (+)	948	WP_014416905.1	iron chelate uptake ABC transporter family permease subunit	-
H2N97_RS01960 (H2N97_01960)	-	395375..396133 (+)	759	WP_012116804.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45521.82 Da
• Isoelectric Point: 5.0732

>NTDB_id=470182 H2N97_RS01930 WP_003156336.1 390123..391271(+) (rapC) [Bacillus velezensis strain JSRB 08]
MKSGLIPSSAVGQKINEWYRYIRTFSVPDAEILKAEIKQELDRMEPDSNLVLYYSLMEFRHQLMLDYLEPLEKLKIEDQP
TLSEILDNIDNSQAGLKGLLDYYVNFFKGMFEFDKREFISAITYYKQAEKKLAFVSDHVERAEFYFKVAEAYYHMKQTYF
SLIHIKNAYEIYVEQDTYNVRIIQCHFVFGVNLMDERRFEQAAKHFQHALQMAEKEQKAQLVGRALYNLGLCYYNQDRIG
EAIPYFERAVDTFESQRIVNSLPQAYFLITLIYFKLGKKEKASEYHKRGYEYAKETDDPVYTVKFEWLQALYQAKPDEEK
ISACFRYLEDKNLYADIEDLALEAAKYYYEQNCFKISSDYFLKVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=470182 H2N97_RS01930 WP_003156336.1 390123..391271(+) (rapC) [Bacillus velezensis strain JSRB 08]
ATGAAGAGCGGGTTAATTCCTTCTTCAGCAGTCGGGCAGAAAATTAACGAGTGGTATCGATACATCAGAACATTCAGCGT
GCCGGATGCGGAGATCTTGAAGGCCGAGATCAAACAAGAGCTTGACCGTATGGAGCCTGATTCAAACTTAGTGCTTTATT
ATTCCCTCATGGAATTTCGCCATCAGCTGATGCTGGACTACTTGGAGCCGCTGGAAAAACTGAAGATAGAAGACCAGCCG
ACCCTGTCGGAAATTCTTGATAACATTGATAACAGCCAGGCCGGCCTCAAAGGGCTTCTCGATTATTACGTCAACTTTTT
CAAAGGCATGTTTGAATTTGATAAAAGAGAATTTATCTCAGCGATTACGTATTATAAACAAGCTGAGAAAAAACTGGCCT
TCGTATCGGACCACGTGGAACGGGCGGAGTTTTATTTTAAAGTGGCCGAAGCTTATTATCATATGAAACAAACGTATTTT
TCTTTGATACATATAAAAAACGCTTATGAAATTTACGTAGAGCAGGACACATATAACGTCCGGATCATTCAATGCCATTT
TGTATTCGGCGTCAATTTAATGGATGAAAGGCGCTTTGAACAGGCGGCCAAACATTTTCAGCACGCTCTGCAAATGGCCG
AAAAAGAACAAAAAGCGCAGCTTGTCGGGAGGGCGCTGTATAACCTCGGACTGTGCTACTACAATCAGGACCGCATCGGC
GAAGCGATTCCGTACTTTGAACGGGCGGTTGATACATTTGAATCACAAAGAATCGTCAATTCTCTTCCTCAAGCATATTT
TCTAATCACACTCATTTACTTTAAACTCGGAAAAAAAGAAAAAGCGTCGGAATATCACAAGCGGGGATATGAATATGCTA
AAGAAACAGACGATCCCGTTTACACGGTAAAATTCGAATGGCTGCAGGCTCTGTATCAGGCGAAACCGGACGAGGAAAAA
ATCAGCGCATGTTTCCGTTACCTGGAAGATAAAAATTTATACGCCGATATAGAGGATTTAGCACTAGAAGCAGCTAAATA
TTACTATGAACAAAATTGCTTTAAGATTTCTTCTGACTATTTTCTGAAAGTCGAAGAGGCAAGGAAACAAATACAAAGGA
GTGAGGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (6-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	82.199	100	0.822
rapF	Bacillus subtilis subsp. subtilis str. 168	57.105	99.476	0.568