Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   H2N97_RS01950 Genome accession   NZ_CP059497
Coordinates   393491..394444 (+) Length   317 a.a.
NCBI ID   WP_014416904.1    Uniprot ID   -
Organism   Bacillus velezensis strain JSRB 08     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 388491..399444
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H2N97_RS01925 (H2N97_01925) - 388537..389970 (+) 1434 WP_134986378.1 HAMP domain-containing sensor histidine kinase -
  H2N97_RS01930 (H2N97_01930) rapC 390123..391271 (+) 1149 WP_003156336.1 Rap family tetratricopeptide repeat protein Regulator
  H2N97_RS01935 (H2N97_01935) phrC 391255..391374 (+) 120 WP_003156334.1 PhrC/PhrF family phosphatase-inhibitory pheromone Regulator
  H2N97_RS01940 (H2N97_01940) - 391524..391634 (-) 111 WP_369719092.1 YjcZ family sporulation protein -
  H2N97_RS01945 (H2N97_01945) - 391714..393078 (-) 1365 WP_053285479.1 aspartate kinase -
  H2N97_RS01950 (H2N97_01950) ceuB 393491..394444 (+) 954 WP_014416904.1 ABC transporter permease Machinery gene
  H2N97_RS01955 (H2N97_01955) - 394434..395381 (+) 948 WP_014416905.1 iron chelate uptake ABC transporter family permease subunit -
  H2N97_RS01960 (H2N97_01960) - 395375..396133 (+) 759 WP_012116804.1 ABC transporter ATP-binding protein -
  H2N97_RS01965 (H2N97_01965) - 396155..397099 (+) 945 WP_021495116.1 siderophore ABC transporter substrate-binding protein -
  H2N97_RS01970 (H2N97_01970) - 397141..398565 (-) 1425 WP_025649997.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 34959.26 Da        Isoelectric Point: 9.6741

>NTDB_id=470184 H2N97_RS01950 WP_014416904.1 393491..394444(+) (ceuB) [Bacillus velezensis strain JSRB 08]
MKLRYLLLLLAVLACTSIFIGVEDLSPLDIFHLNKEQAGTLFDSRLPRLVSIIIAGMSLSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLMLFTSASPLVKMSIAFVFALAGNFLFMKILERIKFNDAIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNLSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTVAGMGESFSVNLGLKYKRVVNIGLIIVSLIASLVILTVGM
LPFLGLIIPNMVSIYKGDNLRSSLPHTALLGAVFVLFCDILGRLIIFPYEISIGLMVGVIGSGIFLYMLLRRKAYES

Nucleotide


Download         Length: 954 bp        

>NTDB_id=470184 H2N97_RS01950 WP_014416904.1 393491..394444(+) (ceuB) [Bacillus velezensis strain JSRB 08]
ATGAAGCTACGTTACTTACTTTTGCTACTGGCGGTTTTGGCGTGTACTTCTATATTTATCGGTGTAGAAGATTTGTCGCC
GCTGGATATTTTTCATTTAAATAAAGAACAGGCAGGTACATTGTTTGACAGCCGGCTGCCGCGTTTGGTGAGCATTATCA
TCGCCGGCATGAGCCTGAGCATCTGCGGATTAATCATGCAGCAGATCAGCCGGAATAAATTTGTATCGCCGACGACTGCG
GGAACGATGGACTGGGCAAGGCTCGGAATTTTGATTTCATTAATGCTTTTTACGTCAGCGAGTCCGCTTGTGAAAATGTC
TATCGCTTTCGTTTTCGCGTTGGCGGGAAATTTCCTTTTCATGAAAATCCTCGAGAGAATCAAGTTCAATGATGCGATTT
TTATTCCTCTCGTCGGTTTAATGCTTGGGAACATCGTCAGCTCAATCGCCACGTTTATCGCATATAAATACGATCTGATC
CAAAACCTGTCATCTTGGCTGCAGGGAGATTTTTCACTGGTCGTCAAAGGCCGGTATGAGCTTTTATATCTGAGTATCCC
GCTGGTGATCATCGCTTATGTGTATGCGGATAAATTTACGGTGGCGGGAATGGGAGAGAGCTTTTCCGTCAATCTCGGCC
TGAAATACAAACGCGTCGTTAATATCGGTCTGATTATCGTGTCGCTCATCGCTTCACTGGTGATCCTGACCGTCGGGATG
CTGCCGTTTCTCGGTTTGATCATTCCCAATATGGTGTCGATTTACAAAGGGGACAACCTGAGGAGCAGCCTGCCCCACAC
CGCTCTCTTGGGCGCTGTTTTTGTACTGTTTTGCGACATTTTGGGAAGGTTGATCATTTTCCCGTACGAAATTTCCATCG
GCCTGATGGTCGGTGTTATCGGCAGCGGCATCTTCCTGTATATGCTGTTAAGGAGAAAAGCATATGAGTCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

54.114

99.685

0.539