Detailed information NTG0470156

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: JR441_RS01630
• Genome accession: NZ_CP069789
• Coordinates: 294395..295516 (+)
• Length: 373 a.a.
• NCBI ID: WP_198879038.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain BIM B-569G
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 289395..300516

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JR441_RS01605 (JR441_01605)	ycdA	289401..290465 (-)	1065	WP_003234750.1	DUF4352 domain-containing protein	-
JR441_RS01610 (JR441_01610)	-	290488..290619 (-)	132	WP_120363245.1	hypothetical protein	-
JR441_RS01615 (JR441_01615)	ycdB	290793..292213 (+)	1421	Protein_273	YcdB/YcdC domain-containing protein	-
JR441_RS01620 (JR441_01620)	ycdC	292400..293761 (+)	1362	WP_153912155.1	YcdB/YcdC domain-containing protein	-
JR441_RS01625 (JR441_01625)	cwlK	293769..294272 (-)	504	WP_120363247.1	peptidoglycan L-alanyl-D-glutamate endopeptidase CwlK	-
JR441_RS01630 (JR441_01630)	rapF	294395..295516 (+)	1122	WP_198879038.1	response regulator aspartate phosphatase RapJ	Regulator
JR441_RS01635 (JR441_01635)	ycdF	295623..296399 (+)	777	WP_204551419.1	SDR family oxidoreductase	-
JR441_RS01640 (JR441_01640)	ycdG	296424..298109 (+)	1686	WP_198879039.1	alpha-glucosidase	-
JR441_RS01645 (JR441_01645)	znuA	298297..299256 (+)	960	WP_086343416.1	metal ABC transporter substrate-binding protein	-
JR441_RS01650 (JR441_01650)	znuC	299312..300007 (+)	696	WP_003234730.1	zinc ABC transporter ATP-binding protein ZnuC	-

Sequence

Protein

• Length: 373 a.a.
• Molecular weight: 44382.25 Da
• Isoelectric Point: 4.8344

>NTDB_id=470156 JR441_RS01630 WP_198879038.1 294395..295516(+) (rapF) [Bacillus subtilis strain BIM B-569G]
MRAKIPSEEVAVKLNEWYKLIRAFEADQAEALKQEIEYDLEDMEENQDLLLYFSLMEFRHRIMLDKLMPVKDSDTKPPFS
DLLNEIESNQQKLTGLLEYYFYYFRGMYEFKQKNFILAIDHYKHAEEKLEYVEDEIEKAEFLFKVAEVYYHIKQTYFSMN
YASQALDIYTKYELYGRRRVQCEFIIAGNLTDVYHHEKALTHLCSALDHARQLEEAYMIAAAYYNVGHCKYSLGDYKEAE
GYFKTAAAIFEEHNFQQAVQAVFSLTHIYCKEGKYDKAVEAYDRGIKSAAEWEDDMYLTKFRLIHELYLGSGDLNVLTEC
FDLLESRQLLADAEDLLHDTAERFNQLEHYESAAFFYRRLMNIKKKLAEQRFQ

Nucleotide

• Length: 1122 bp

>NTDB_id=470156 JR441_RS01630 WP_198879038.1 294395..295516(+) (rapF) [Bacillus subtilis strain BIM B-569G]
ATGAGAGCAAAGATTCCATCAGAAGAAGTAGCAGTAAAGCTGAATGAATGGTACAAGCTCATTCGCGCATTTGAAGCAGA
TCAAGCAGAAGCGTTAAAGCAGGAGATTGAATACGATTTAGAAGATATGGAAGAGAACCAGGACTTGCTTTTATATTTTT
CTTTGATGGAATTCCGGCATCGAATCATGCTTGATAAGCTGATGCCGGTGAAAGACAGCGACACCAAGCCTCCGTTCTCT
GATTTGCTGAACGAAATTGAAAGCAATCAGCAAAAACTCACGGGCTTATTGGAATACTACTTTTATTATTTCAGAGGAAT
GTACGAATTCAAGCAGAAAAATTTCATATTAGCGATCGACCATTATAAACATGCCGAGGAAAAGCTCGAGTATGTCGAGG
ATGAGATCGAAAAAGCTGAGTTTCTTTTTAAAGTCGCAGAAGTGTATTATCACATCAAACAAACGTATTTTTCCATGAAT
TATGCGAGCCAGGCGCTTGATATCTATACGAAATATGAACTGTACGGTCGCCGCCGGGTTCAGTGTGAATTTATCATCGC
CGGAAATTTGACCGATGTGTATCATCATGAAAAAGCACTGACCCACTTGTGCAGCGCTTTAGATCATGCCAGGCAGCTTG
AAGAAGCATACATGATCGCCGCTGCCTATTATAATGTCGGACACTGTAAGTACAGTCTGGGTGATTACAAAGAAGCGGAG
GGCTATTTCAAAACAGCCGCCGCCATTTTTGAGGAGCACAACTTTCAGCAAGCTGTTCAAGCTGTATTTTCACTGACCCA
TATCTACTGTAAAGAGGGAAAATATGACAAGGCAGTAGAGGCGTATGACCGCGGGATAAAGAGCGCGGCTGAATGGGAGG
ATGACATGTACTTGACGAAATTCCGCCTCATTCATGAGCTGTATCTTGGAAGCGGCGACCTGAACGTGCTTACAGAATGC
TTTGATCTGCTGGAATCCAGGCAGCTTCTTGCTGACGCCGAAGATCTGCTGCATGATACAGCGGAACGTTTCAATCAGCT
GGAACATTACGAGTCCGCCGCTTTCTTTTACCGCAGGCTGATGAATATTAAAAAGAAGCTTGCTGAGCAGCGTTTTCAAT
AG

Domains

Predicted by InterProScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	42.663	98.66	0.421
rapC	Bacillus subtilis subsp. subtilis str. 168	41.53	98.123	0.408