Detailed information    

insolico Bioinformatically predicted

Overview

Name   comA   Type   Regulator
Locus tag   H2N74_RS15155 Genome accession   NZ_CP059495
Coordinates   3089024..3089668 (-) Length   214 a.a.
NCBI ID   WP_003152052.1    Uniprot ID   A3KLB8
Organism   Bacillus velezensis strain JSRB 166     
Function   promoting transcription of comS (predicted from homology)   
Competence regulation

Genomic Context

Location: 3084024..3094668
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H2N74_RS15120 (H2N74_15120) - 3085209..3085640 (+) 432 WP_007613424.1 Na(+)/H(+) antiporter subunit B -
  H2N74_RS15125 (H2N74_15125) - 3085640..3085981 (+) 342 WP_022553706.1 Na(+)/H(+) antiporter subunit C -
  H2N74_RS15130 (H2N74_15130) - 3085974..3087455 (+) 1482 WP_182071954.1 Na+/H+ antiporter subunit D -
  H2N74_RS15135 (H2N74_15135) - 3087461..3087937 (+) 477 WP_007408672.1 Na+/H+ antiporter subunit E -
  H2N74_RS15140 (H2N74_15140) - 3087937..3088221 (+) 285 WP_003152057.1 Na(+)/H(+) antiporter subunit F1 -
  H2N74_RS15145 (H2N74_15145) mnhG 3088205..3088579 (+) 375 WP_007613429.1 monovalent cation/H(+) antiporter subunit G -
  H2N74_RS15150 (H2N74_15150) - 3088619..3089002 (-) 384 WP_007613430.1 hotdog fold thioesterase -
  H2N74_RS15155 (H2N74_15155) comA 3089024..3089668 (-) 645 WP_003152052.1 response regulator transcription factor Regulator
  H2N74_RS15160 (H2N74_15160) comP 3089749..3092052 (-) 2304 WP_021495364.1 histidine kinase Regulator
  H2N74_RS15165 (H2N74_15165) comQ 3092178..3093137 (-) 960 WP_233662477.1 class 1 isoprenoid biosynthesis enzyme Regulator
  H2N74_RS15170 (H2N74_15170) degQ 3093322..3093462 (-) 141 WP_003152043.1 degradation enzyme regulation protein DegQ Regulator
  H2N74_RS15175 (H2N74_15175) - 3093928..3094269 (+) 342 WP_007613435.1 hypothetical protein -

Sequence

Protein


Download         Length: 214 a.a.        Molecular weight: 24271.68 Da        Isoelectric Point: 4.9953

>NTDB_id=470156 H2N74_RS15155 WP_003152052.1 3089024..3089668(-) (comA) [Bacillus velezensis strain JSRB 166]
MKKILVIDDHPAVMEGTKTILETDTNLSVDCLSPDASEQFVLRHDFSAYDLILMDLNLGDDISGIELSKKILKENPLCKI
IVYTGYEVEDYFEESIRAGLHGAISKTESKEKIMQYIYHVLNGQILVDFSYFKQLMTQQKTKTSSSPQSEQDRLTPRERH
ILQEVEKGLTNQEIADALHLSKRSIEYSLTSIFNKLNVGSRTEAVLIAKSDNVL

Nucleotide


Download         Length: 645 bp        

>NTDB_id=470156 H2N74_RS15155 WP_003152052.1 3089024..3089668(-) (comA) [Bacillus velezensis strain JSRB 166]
ATGAAAAAGATACTAGTGATTGATGATCATCCGGCTGTCATGGAGGGCACCAAGACGATTCTGGAAACGGACACGAATCT
TTCTGTCGATTGCCTCAGTCCTGATGCCAGTGAACAATTTGTTCTCCGGCATGATTTTTCAGCTTACGATCTCATATTAA
TGGATTTAAATCTGGGTGATGACATCAGCGGCATAGAGCTTTCCAAGAAAATCTTAAAAGAGAATCCTCTCTGTAAAATC
ATTGTCTACACAGGCTATGAGGTTGAAGATTATTTTGAAGAATCCATCCGCGCGGGCCTGCATGGCGCCATCAGCAAAAC
TGAATCTAAAGAGAAAATCATGCAATACATATATCACGTGCTCAACGGACAGATTTTAGTTGATTTCTCCTATTTCAAAC
AGCTGATGACCCAGCAAAAAACAAAAACGTCTTCTTCCCCTCAAAGTGAGCAGGATCGGTTAACCCCGAGAGAGCGCCAT
ATTCTCCAAGAGGTCGAAAAAGGTTTGACCAATCAGGAAATCGCAGATGCGCTTCACTTAAGCAAGCGGTCGATTGAATA
CAGCCTGACATCCATTTTTAACAAGCTGAATGTCGGCTCCCGAACTGAAGCGGTGCTGATCGCCAAGTCAGATAACGTAC
TATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(4-117)

Bacterial regulatory proteins, luxR family (GerE)

(153-208)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A3KLB8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comA Bacillus subtilis subsp. subtilis str. 168

86.449

100

0.864