Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   H2N74_RS01960 Genome accession   NZ_CP059495
Coordinates   393718..394671 (+) Length   317 a.a.
NCBI ID   WP_014416904.1    Uniprot ID   -
Organism   Bacillus velezensis strain JSRB 166     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 388718..399671
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H2N74_RS01935 (H2N74_01935) - 388764..390191 (+) 1428 WP_100261600.1 HAMP domain-containing sensor histidine kinase -
  H2N74_RS01940 (H2N74_01940) rapC 390349..391497 (+) 1149 WP_014304340.1 Rap family tetratricopeptide repeat protein Regulator
  H2N74_RS01945 (H2N74_01945) phrC 391481..391600 (+) 120 WP_003156334.1 PhrC/PhrF family phosphatase-inhibitory pheromone Regulator
  H2N74_RS01950 (H2N74_01950) - 391751..391861 (-) 111 WP_369878517.1 YjcZ family sporulation protein -
  H2N74_RS01955 (H2N74_01955) - 391941..393305 (-) 1365 WP_053285479.1 aspartate kinase -
  H2N74_RS01960 (H2N74_01960) ceuB 393718..394671 (+) 954 WP_014416904.1 ABC transporter permease Machinery gene
  H2N74_RS01965 (H2N74_01965) - 394661..395608 (+) 948 WP_014416905.1 iron chelate uptake ABC transporter family permease subunit -
  H2N74_RS01970 (H2N74_01970) - 395602..396360 (+) 759 WP_003156330.1 ABC transporter ATP-binding protein -
  H2N74_RS01975 (H2N74_01975) - 396382..397326 (+) 945 WP_021495116.1 siderophore ABC transporter substrate-binding protein -
  H2N74_RS01980 (H2N74_01980) - 397368..398792 (-) 1425 WP_017419270.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 34959.26 Da        Isoelectric Point: 9.6741

>NTDB_id=470108 H2N74_RS01960 WP_014416904.1 393718..394671(+) (ceuB) [Bacillus velezensis strain JSRB 166]
MKLRYLLLLLAVLACTSIFIGVEDLSPLDIFHLNKEQAGTLFDSRLPRLVSIIIAGMSLSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLMLFTSASPLVKMSIAFVFALAGNFLFMKILERIKFNDAIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNLSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTVAGMGESFSVNLGLKYKRVVNIGLIIVSLIASLVILTVGM
LPFLGLIIPNMVSIYKGDNLRSSLPHTALLGAVFVLFCDILGRLIIFPYEISIGLMVGVIGSGIFLYMLLRRKAYES

Nucleotide


Download         Length: 954 bp        

>NTDB_id=470108 H2N74_RS01960 WP_014416904.1 393718..394671(+) (ceuB) [Bacillus velezensis strain JSRB 166]
ATGAAGCTACGTTACTTACTTTTGCTACTGGCGGTTTTGGCGTGTACTTCTATATTTATCGGTGTAGAAGATTTGTCGCC
GCTGGATATTTTTCATTTAAATAAAGAACAGGCAGGTACATTGTTTGACAGCCGGCTGCCGCGTTTGGTGAGCATTATCA
TCGCCGGCATGAGCCTGAGCATCTGCGGATTAATCATGCAGCAGATCAGCCGGAATAAATTTGTATCGCCAACGACTGCG
GGAACGATGGACTGGGCAAGGCTCGGAATTTTGATTTCATTAATGCTTTTTACGTCAGCGAGTCCGCTTGTGAAAATGTC
TATCGCTTTCGTTTTCGCGTTGGCGGGAAATTTCCTTTTCATGAAAATCCTCGAGAGAATCAAGTTCAATGATGCGATTT
TTATTCCTCTCGTCGGTTTAATGCTTGGGAACATCGTCAGCTCAATCGCCACGTTTATCGCATATAAATACGATCTGATC
CAAAACCTGTCATCTTGGCTGCAGGGAGATTTTTCACTGGTCGTCAAAGGCCGGTATGAGCTTTTATATCTGAGTATCCC
GCTGGTGATCATCGCTTATGTGTATGCGGATAAATTTACGGTGGCGGGAATGGGAGAGAGCTTTTCCGTCAATCTCGGCC
TGAAATACAAACGCGTCGTTAATATCGGTCTGATTATCGTGTCGCTCATCGCTTCACTGGTGATCCTGACCGTCGGGATG
CTGCCGTTTCTCGGTTTGATCATTCCCAATATGGTGTCGATTTACAAAGGGGACAACCTGAGGAGCAGCCTGCCCCACAC
CGCTCTCTTGGGCGCTGTTTTTGTACTGTTTTGCGACATTTTGGGAAGGTTGATCATTTTCCCGTACGAAATTTCCATCG
GCCTGATGGTCGGTGTTATCGGCAGCGGCATCTTCCTGTATATGCTGTTAAGGAGAAAAGCATATGAGTCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

54.114

99.685

0.539