Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | H2R00_RS14495 | Genome accession | NZ_CP059494 |
| Coordinates | 2931698..2934130 (-) | Length | 810 a.a. |
| NCBI ID | WP_075752568.1 | Uniprot ID | - |
| Organism | Bacillus haynesii strain P19 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2926698..2939130
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H2R00_RS14470 | ispF | 2926759..2927235 (-) | 477 | WP_152849939.1 | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase | - |
| H2R00_RS14475 | ispD | 2927228..2927923 (-) | 696 | WP_182069554.1 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase | - |
| H2R00_RS14480 | - | 2927940..2929028 (-) | 1089 | WP_154999859.1 | PIN/TRAM domain-containing protein | - |
| H2R00_RS14485 | disA | 2929159..2930235 (-) | 1077 | WP_182069556.1 | DNA integrity scanning diadenylate cyclase DisA | - |
| H2R00_RS14490 | radA | 2930239..2931618 (-) | 1380 | WP_154999861.1 | DNA repair protein RadA | Machinery gene |
| H2R00_RS14495 | clpC | 2931698..2934130 (-) | 2433 | WP_075752568.1 | ATP-dependent protease ATP-binding subunit ClpC | Regulator |
| H2R00_RS14500 | - | 2934127..2935218 (-) | 1092 | WP_003178273.1 | protein arginine kinase | - |
| H2R00_RS14505 | - | 2935218..2935772 (-) | 555 | WP_003178271.1 | UvrB/UvrC motif-containing protein | - |
| H2R00_RS14510 | - | 2935787..2936251 (-) | 465 | WP_003178269.1 | CtsR family transcriptional regulator | - |
Sequence
Protein
Download Length: 810 a.a. Molecular weight: 90235.79 Da Isoelectric Point: 5.8564
>NTDB_id=470075 H2R00_RS14495 WP_075752568.1 2931698..2934130(-) (clpC) [Bacillus haynesii strain P19]
MMFGRFTERAQKVLALAQEEALRLGHNNIGTEHILLGLVREGEGIAAKALQALGLSPDKIQKEVESLIGRGQEMSQSIHY
TPRAKKVTELAMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNESGGAASGANSNANT
PTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIINNEVPEILRDKRVM
TLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEY
RKYIEKDAALERRFQPIQVDQPSPEESIQILRGLRDRYEAHHRVSITDEAIEAAVKLSDRYISDRFLPDKAIDLIDEAGS
KVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTEQRLREQVEETKKTWKEKQGQENSEVTVDDIAMVV
SSWTGVPVSKIAQTETDKLLNMESILHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAE
SIFGDEEAMIRIDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRLT
DSKGRTVDFRNTILIMTSNVGASELRRNKYVGFNVQDETQNYKDMKDKVMGELKRAFRPEFINRIDEIIVFHSLEKKHLK
DIVSLMSEQLTKRLKEQDLSIELTEAAKEKIADEGVDLEYGARPLRRAIQKHVEDRLSEELLKGHIEKGQHIVLDVEDGE
FVVKTEAKTN
MMFGRFTERAQKVLALAQEEALRLGHNNIGTEHILLGLVREGEGIAAKALQALGLSPDKIQKEVESLIGRGQEMSQSIHY
TPRAKKVTELAMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNESGGAASGANSNANT
PTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIINNEVPEILRDKRVM
TLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEY
RKYIEKDAALERRFQPIQVDQPSPEESIQILRGLRDRYEAHHRVSITDEAIEAAVKLSDRYISDRFLPDKAIDLIDEAGS
KVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTEQRLREQVEETKKTWKEKQGQENSEVTVDDIAMVV
SSWTGVPVSKIAQTETDKLLNMESILHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAE
SIFGDEEAMIRIDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRLT
DSKGRTVDFRNTILIMTSNVGASELRRNKYVGFNVQDETQNYKDMKDKVMGELKRAFRPEFINRIDEIIVFHSLEKKHLK
DIVSLMSEQLTKRLKEQDLSIELTEAAKEKIADEGVDLEYGARPLRRAIQKHVEDRLSEELLKGHIEKGQHIVLDVEDGE
FVVKTEAKTN
Nucleotide
Download Length: 2433 bp
>NTDB_id=470075 H2R00_RS14495 WP_075752568.1 2931698..2934130(-) (clpC) [Bacillus haynesii strain P19]
ATGATGTTTGGAAGATTCACAGAAAGAGCACAAAAAGTATTGGCGCTTGCTCAAGAAGAAGCTCTGCGTCTGGGCCATAA
TAACATTGGAACAGAACATATTCTCCTCGGCCTTGTCCGCGAGGGAGAAGGAATTGCTGCAAAAGCGCTGCAGGCATTAG
GACTCAGCCCTGACAAGATTCAAAAAGAAGTAGAAAGCCTCATCGGCCGCGGGCAAGAGATGTCACAATCAATCCATTAC
ACGCCGAGAGCCAAAAAAGTGACCGAACTGGCGATGGATGAAGCAAGAAAACTTGGCCACTCCTACGTTGGAACAGAACA
CATCCTCCTCGGCTTAATCCGTGAAGGGGAAGGTGTTGCGGCAAGGGTGCTGAATAATTTAGGCGTCAGCTTAAACAAAG
CGAGACAGCAAGTATTGCAGCTGTTGGGGAGCAATGAGAGCGGTGGCGCTGCTTCAGGCGCCAACAGCAATGCCAATACA
CCAACCTTAGACAGTCTTGCCCGGGATCTCACGGCGATTGCAAAAGAAGACAGCCTTGATCCCGTGATCGGCAGAAGCAA
AGAAATTCAGCGCGTAATTGAAGTGCTGAGCCGCAGAACGAAAAACAACCCTGTATTAATTGGAGAGCCCGGTGTCGGTA
AAACGGCGATTGCCGAAGGTCTGGCCCAGCAGATCATCAATAATGAAGTACCGGAGATTTTACGCGACAAGCGCGTGATG
ACGCTTGATATGGGAACGGTTGTTGCCGGTACGAAATACCGCGGTGAATTTGAAGACCGCCTGAAAAAAGTGATGGACGA
AATTCGTCAAGCGGGAAATATCATCCTCTTCATTGATGAGCTGCATACTCTCATCGGAGCCGGAGGAGCGGAAGGGGCCA
TCGATGCCTCCAATATCCTTAAACCGTCGCTGGCGCGCGGAGAGCTGCAATGCATCGGAGCAACAACCCTTGATGAATAC
CGCAAATACATTGAAAAAGATGCTGCACTCGAACGGCGTTTTCAGCCGATTCAGGTTGACCAGCCGTCTCCTGAAGAAAG
CATTCAAATATTGAGAGGGCTCAGAGACCGCTATGAAGCCCACCACCGCGTATCGATTACAGATGAAGCGATCGAAGCGG
CAGTGAAGCTGTCAGACCGCTACATTTCGGATCGTTTTCTACCTGACAAGGCGATCGACTTAATCGATGAAGCCGGTTCA
AAAGTTCGCCTGCGTTCATTCACAACGCCTCCTAACTTAAAAGAGCTTGAACAAAAGCTTGATGAAGTAAGGAAAGAAAA
AGATGCCGCTGTCCAAAGCCAGGAATTCGAAAAAGCAGCATCTTTACGAGATACGGAGCAGCGCCTGCGTGAACAGGTCG
AAGAAACCAAGAAAACATGGAAAGAAAAGCAGGGTCAAGAAAATTCCGAAGTGACCGTCGACGATATTGCAATGGTTGTA
TCAAGCTGGACCGGAGTGCCGGTTTCTAAAATTGCGCAGACTGAAACAGACAAATTGCTGAACATGGAGAGCATTCTTCA
TTCCCGTGTTATCGGCCAGGATGAAGCCGTCGTTGCGGTGGCAAAAGCAGTCAGACGCGCGCGTGCCGGCTTAAAAGATC
CAAAACGTCCTATCGGTTCGTTTATTTTCCTCGGCCCTACCGGCGTAGGAAAAACAGAGCTTGCCCGTGCACTTGCCGAG
TCCATTTTCGGCGATGAAGAAGCAATGATTCGCATCGATATGTCCGAGTACATGGAAAAACATTCAACATCAAGACTCGT
CGGTTCCCCTCCGGGATATGTCGGTTATGATGAAGGCGGACAGCTCACTGAAAAAGTGAGAAGAAAACCGTATTCCGTCG
TCTTGCTTGACGAAATCGAGAAAGCTCACCCTGATGTCTTCAATATTTTGCTGCAAGTGCTTGAAGACGGCCGCCTGACT
GATTCAAAAGGGCGCACGGTCGACTTTAGAAATACGATTTTGATCATGACATCAAACGTCGGTGCGAGCGAACTGAGAAG
AAATAAATACGTCGGGTTTAATGTGCAGGATGAAACCCAGAATTATAAAGATATGAAAGACAAAGTCATGGGTGAATTAA
AACGCGCCTTCAGACCTGAATTTATCAACCGGATTGATGAAATTATCGTCTTCCACTCTTTGGAGAAAAAACATTTGAAA
GATATTGTATCCCTCATGTCAGAACAATTGACCAAGCGTCTGAAAGAACAGGATCTTTCAATTGAGTTGACTGAAGCGGC
TAAAGAAAAAATTGCCGATGAAGGCGTGGATCTCGAATACGGGGCGCGTCCTCTCAGAAGAGCAATCCAAAAACACGTGG
AAGACCGGCTGTCTGAAGAGCTCCTGAAAGGCCATATTGAAAAAGGCCAGCATATTGTTTTGGATGTAGAAGACGGAGAA
TTTGTCGTAAAAACCGAAGCTAAAACGAACTAA
ATGATGTTTGGAAGATTCACAGAAAGAGCACAAAAAGTATTGGCGCTTGCTCAAGAAGAAGCTCTGCGTCTGGGCCATAA
TAACATTGGAACAGAACATATTCTCCTCGGCCTTGTCCGCGAGGGAGAAGGAATTGCTGCAAAAGCGCTGCAGGCATTAG
GACTCAGCCCTGACAAGATTCAAAAAGAAGTAGAAAGCCTCATCGGCCGCGGGCAAGAGATGTCACAATCAATCCATTAC
ACGCCGAGAGCCAAAAAAGTGACCGAACTGGCGATGGATGAAGCAAGAAAACTTGGCCACTCCTACGTTGGAACAGAACA
CATCCTCCTCGGCTTAATCCGTGAAGGGGAAGGTGTTGCGGCAAGGGTGCTGAATAATTTAGGCGTCAGCTTAAACAAAG
CGAGACAGCAAGTATTGCAGCTGTTGGGGAGCAATGAGAGCGGTGGCGCTGCTTCAGGCGCCAACAGCAATGCCAATACA
CCAACCTTAGACAGTCTTGCCCGGGATCTCACGGCGATTGCAAAAGAAGACAGCCTTGATCCCGTGATCGGCAGAAGCAA
AGAAATTCAGCGCGTAATTGAAGTGCTGAGCCGCAGAACGAAAAACAACCCTGTATTAATTGGAGAGCCCGGTGTCGGTA
AAACGGCGATTGCCGAAGGTCTGGCCCAGCAGATCATCAATAATGAAGTACCGGAGATTTTACGCGACAAGCGCGTGATG
ACGCTTGATATGGGAACGGTTGTTGCCGGTACGAAATACCGCGGTGAATTTGAAGACCGCCTGAAAAAAGTGATGGACGA
AATTCGTCAAGCGGGAAATATCATCCTCTTCATTGATGAGCTGCATACTCTCATCGGAGCCGGAGGAGCGGAAGGGGCCA
TCGATGCCTCCAATATCCTTAAACCGTCGCTGGCGCGCGGAGAGCTGCAATGCATCGGAGCAACAACCCTTGATGAATAC
CGCAAATACATTGAAAAAGATGCTGCACTCGAACGGCGTTTTCAGCCGATTCAGGTTGACCAGCCGTCTCCTGAAGAAAG
CATTCAAATATTGAGAGGGCTCAGAGACCGCTATGAAGCCCACCACCGCGTATCGATTACAGATGAAGCGATCGAAGCGG
CAGTGAAGCTGTCAGACCGCTACATTTCGGATCGTTTTCTACCTGACAAGGCGATCGACTTAATCGATGAAGCCGGTTCA
AAAGTTCGCCTGCGTTCATTCACAACGCCTCCTAACTTAAAAGAGCTTGAACAAAAGCTTGATGAAGTAAGGAAAGAAAA
AGATGCCGCTGTCCAAAGCCAGGAATTCGAAAAAGCAGCATCTTTACGAGATACGGAGCAGCGCCTGCGTGAACAGGTCG
AAGAAACCAAGAAAACATGGAAAGAAAAGCAGGGTCAAGAAAATTCCGAAGTGACCGTCGACGATATTGCAATGGTTGTA
TCAAGCTGGACCGGAGTGCCGGTTTCTAAAATTGCGCAGACTGAAACAGACAAATTGCTGAACATGGAGAGCATTCTTCA
TTCCCGTGTTATCGGCCAGGATGAAGCCGTCGTTGCGGTGGCAAAAGCAGTCAGACGCGCGCGTGCCGGCTTAAAAGATC
CAAAACGTCCTATCGGTTCGTTTATTTTCCTCGGCCCTACCGGCGTAGGAAAAACAGAGCTTGCCCGTGCACTTGCCGAG
TCCATTTTCGGCGATGAAGAAGCAATGATTCGCATCGATATGTCCGAGTACATGGAAAAACATTCAACATCAAGACTCGT
CGGTTCCCCTCCGGGATATGTCGGTTATGATGAAGGCGGACAGCTCACTGAAAAAGTGAGAAGAAAACCGTATTCCGTCG
TCTTGCTTGACGAAATCGAGAAAGCTCACCCTGATGTCTTCAATATTTTGCTGCAAGTGCTTGAAGACGGCCGCCTGACT
GATTCAAAAGGGCGCACGGTCGACTTTAGAAATACGATTTTGATCATGACATCAAACGTCGGTGCGAGCGAACTGAGAAG
AAATAAATACGTCGGGTTTAATGTGCAGGATGAAACCCAGAATTATAAAGATATGAAAGACAAAGTCATGGGTGAATTAA
AACGCGCCTTCAGACCTGAATTTATCAACCGGATTGATGAAATTATCGTCTTCCACTCTTTGGAGAAAAAACATTTGAAA
GATATTGTATCCCTCATGTCAGAACAATTGACCAAGCGTCTGAAAGAACAGGATCTTTCAATTGAGTTGACTGAAGCGGC
TAAAGAAAAAATTGCCGATGAAGGCGTGGATCTCGAATACGGGGCGCGTCCTCTCAGAAGAGCAATCCAAAAACACGTGG
AAGACCGGCTGTCTGAAGAGCTCCTGAAAGGCCATATTGAAAAAGGCCAGCATATTGTTTTGGATGTAGAAGACGGAGAA
TTTGTCGTAAAAACCGAAGCTAAAACGAACTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
96.049 |
100 |
0.96 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
50.375 |
98.765 |
0.498 |
| clpC | Streptococcus thermophilus LMG 18311 |
46.973 |
100 |
0.479 |
| clpC | Streptococcus thermophilus LMD-9 |
46.852 |
100 |
0.478 |
| clpC | Streptococcus pneumoniae Rx1 |
45.488 |
99.877 |
0.454 |
| clpC | Streptococcus pneumoniae D39 |
45.488 |
99.877 |
0.454 |
| clpC | Streptococcus pneumoniae TIGR4 |
45.365 |
99.877 |
0.453 |
| clpC | Streptococcus mutans UA159 |
43.728 |
100 |
0.452 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
48.464 |
88.395 |
0.428 |
| clpE | Streptococcus mutans UA159 |
53.313 |
80.123 |
0.427 |
| clpE | Streptococcus pneumoniae Rx1 |
51.926 |
80.123 |
0.416 |
| clpE | Streptococcus pneumoniae D39 |
51.926 |
80.123 |
0.416 |
| clpE | Streptococcus pneumoniae R6 |
51.926 |
80.123 |
0.416 |
| clpE | Streptococcus pneumoniae TIGR4 |
52.756 |
78.395 |
0.414 |