Detailed information    

insolico Bioinformatically predicted

Overview

Name   med   Type   Regulator
Locus tag   H2R00_RS08925 Genome accession   NZ_CP059494
Coordinates   1791054..1792007 (-) Length   317 a.a.
NCBI ID   WP_073426282.1    Uniprot ID   -
Organism   Bacillus haynesii strain P19     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1786054..1797007
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H2R00_RS08895 - 1786163..1787137 (-) 975 WP_075753440.1 ABC transporter ATP-binding protein -
  H2R00_RS08900 - 1787329..1788117 (-) 789 WP_182070871.1 DUF2268 domain-containing protein -
  H2R00_RS08905 fabF 1788205..1789443 (-) 1239 WP_073426285.1 beta-ketoacyl-ACP synthase II -
  H2R00_RS08910 - 1789465..1790403 (-) 939 WP_073426284.1 beta-ketoacyl-ACP synthase III -
  H2R00_RS08915 - 1790573..1790806 (+) 234 WP_154997989.1 hypothetical protein -
  H2R00_RS08920 comZ 1790858..1791028 (-) 171 WP_073426311.1 ComZ family protein Regulator
  H2R00_RS08925 med 1791054..1792007 (-) 954 WP_073426282.1 BMP family ABC transporter substrate-binding protein Regulator
  H2R00_RS08930 - 1792093..1792668 (-) 576 WP_073426281.1 hypothetical protein -
  H2R00_RS08935 - 1792755..1793489 (-) 735 WP_154998011.1 hypothetical protein -
  H2R00_RS08940 - 1793730..1793915 (+) 186 WP_003180576.1 YjzD family protein -
  H2R00_RS08945 - 1793988..1794167 (-) 180 WP_003180573.1 YjzC family protein -
  H2R00_RS08950 - 1794349..1795161 (+) 813 WP_182070872.1 undecaprenyl-diphosphate phosphatase -
  H2R00_RS08955 argF 1795196..1796146 (-) 951 WP_154997991.1 ornithine carbamoyltransferase -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 35450.19 Da        Isoelectric Point: 4.7283

>NTDB_id=470061 H2R00_RS08925 WP_073426282.1 1791054..1792007(-) (med) [Bacillus haynesii strain P19]
MVYRLVAIFFILLTLSGCGQSPLKGKIEKVGLLVPDTISDQVWGTKGYKGLLRIQSVYNVDVYYKEGINNDAAIKMAVED
FHKKGVNLIYGHGSEYEKAFNEICKDYPDIHFVLMNSKAEHQNVTSISLEGEAMGFFGGMTAAHQSKTKKIGVLATYKWQ
PEVEGFAEGAKYLDPDIEVMTEYVGQWDDSENAVKLYEKMKEAGADVVYPAGDGYNVPVIEQIKKDGLYAIGYVSDQSEL
GENVVLTSTIQHVDDAYELTADEFNKGTLKGGKRSFDIQEGVIEMGKFSPVVDQSFQEEMKRLIDEYKKTNKLPNEH

Nucleotide


Download         Length: 954 bp        

>NTDB_id=470061 H2R00_RS08925 WP_073426282.1 1791054..1792007(-) (med) [Bacillus haynesii strain P19]
ATGGTGTACAGGCTTGTCGCGATTTTTTTCATTCTCCTGACGCTAAGCGGCTGCGGACAATCGCCGCTGAAAGGGAAAAT
TGAAAAAGTCGGTTTGCTTGTCCCTGATACGATAAGTGATCAAGTATGGGGAACCAAAGGATATAAAGGATTATTAAGAA
TACAATCCGTCTACAATGTCGACGTCTATTATAAAGAAGGAATCAACAATGATGCGGCCATTAAAATGGCTGTAGAAGAT
TTTCACAAAAAAGGCGTCAACCTCATCTACGGGCACGGAAGCGAATACGAAAAAGCCTTTAATGAGATATGCAAAGATTA
TCCTGATATTCATTTTGTTTTAATGAACTCTAAAGCCGAACACCAAAATGTGACAAGCATATCGCTTGAAGGCGAAGCGA
TGGGATTTTTCGGCGGAATGACGGCGGCCCATCAGTCAAAAACAAAGAAAATCGGAGTCCTCGCAACGTATAAATGGCAG
CCTGAAGTAGAAGGGTTTGCAGAAGGAGCAAAATACCTCGATCCGGACATTGAGGTGATGACAGAATATGTCGGCCAGTG
GGACGACAGTGAAAATGCCGTCAAACTGTATGAAAAAATGAAGGAGGCAGGCGCGGATGTTGTGTATCCGGCCGGAGACG
GGTATAATGTCCCTGTCATTGAACAAATCAAAAAGGACGGGCTGTACGCTATCGGCTATGTAAGCGACCAGTCGGAATTG
GGTGAGAATGTCGTTTTGACAAGCACCATACAGCATGTAGACGACGCTTATGAACTCACCGCCGACGAATTTAATAAAGG
AACGCTTAAAGGCGGCAAGCGGTCATTTGACATTCAAGAAGGCGTCATCGAGATGGGGAAATTCAGCCCTGTTGTCGATC
AGTCATTTCAAGAAGAGATGAAACGGCTGATTGACGAATACAAAAAAACGAACAAACTGCCAAACGAACATTGA

Domains

Predicted by InterproScan.

ABC transporter substrate-binding protein PnrA-like (Bmp)

(27-314)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  med Bacillus subtilis subsp. subtilis str. 168

67.834

99.054

0.672