Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   H2R00_RS08920 Genome accession   NZ_CP059494
Coordinates   1790858..1791028 (-) Length   56 a.a.
NCBI ID   WP_073426311.1    Uniprot ID   A0AA90EBR6
Organism   Bacillus haynesii strain P19     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1785858..1796028
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H2R00_RS08895 - 1786163..1787137 (-) 975 WP_075753440.1 ABC transporter ATP-binding protein -
  H2R00_RS08900 - 1787329..1788117 (-) 789 WP_182070871.1 DUF2268 domain-containing protein -
  H2R00_RS08905 fabF 1788205..1789443 (-) 1239 WP_073426285.1 beta-ketoacyl-ACP synthase II -
  H2R00_RS08910 - 1789465..1790403 (-) 939 WP_073426284.1 beta-ketoacyl-ACP synthase III -
  H2R00_RS08915 - 1790573..1790806 (+) 234 WP_154997989.1 hypothetical protein -
  H2R00_RS08920 comZ 1790858..1791028 (-) 171 WP_073426311.1 ComZ family protein Regulator
  H2R00_RS08925 med 1791054..1792007 (-) 954 WP_073426282.1 BMP family ABC transporter substrate-binding protein Regulator
  H2R00_RS08930 - 1792093..1792668 (-) 576 WP_073426281.1 hypothetical protein -
  H2R00_RS08935 - 1792755..1793489 (-) 735 WP_154998011.1 hypothetical protein -
  H2R00_RS08940 - 1793730..1793915 (+) 186 WP_003180576.1 YjzD family protein -
  H2R00_RS08945 - 1793988..1794167 (-) 180 WP_003180573.1 YjzC family protein -
  H2R00_RS08950 - 1794349..1795161 (+) 813 WP_182070872.1 undecaprenyl-diphosphate phosphatase -

Sequence

Protein


Download         Length: 56 a.a.        Molecular weight: 6216.23 Da        Isoelectric Point: 4.0275

>NTDB_id=470060 H2R00_RS08920 WP_073426311.1 1790858..1791028(-) (comZ) [Bacillus haynesii strain P19]
MEFLQIAMKYVPEAKAEMEKAGIELSPEMLEPFMNLFTKVMAEAYELGKADAGSDA

Nucleotide


Download         Length: 171 bp        

>NTDB_id=470060 H2R00_RS08920 WP_073426311.1 1790858..1791028(-) (comZ) [Bacillus haynesii strain P19]
ATGGAATTTTTGCAAATTGCTATGAAATACGTTCCGGAAGCGAAGGCAGAGATGGAGAAAGCGGGAATCGAACTTTCGCC
GGAAATGCTTGAGCCGTTCATGAACTTGTTTACAAAAGTGATGGCCGAGGCTTACGAGCTCGGTAAAGCGGACGCCGGTT
CAGACGCCTGA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(1-52)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

73.214

100

0.732