Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   H2R00_RS02470 Genome accession   NZ_CP059494
Coordinates   470042..470842 (+) Length   266 a.a.
NCBI ID   WP_154994145.1    Uniprot ID   -
Organism   Bacillus haynesii strain P19     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 465042..475842
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H2R00_RS02450 - 465067..465912 (+) 846 WP_154994148.1 TlyA family RNA methyltransferase -
  H2R00_RS02455 argR 466077..466526 (+) 450 WP_003183369.1 transcriptional regulator ArgR -
  H2R00_RS02460 recN 466558..468288 (+) 1731 WP_182070399.1 DNA repair protein RecN Machinery gene
  H2R00_RS02465 spoIVB 468436..469752 (+) 1317 WP_043927930.1 SpoIVB peptidase -
  H2R00_RS02470 spo0A 470042..470842 (+) 801 WP_154994145.1 sporulation transcription factor Spo0A Regulator
  H2R00_RS02475 - 471135..471704 (+) 570 WP_182071007.1 serine acetyltransferase -
  H2R00_RS02480 - 472087..472548 (+) 462 WP_244958274.1 membrane bound lipoprotein -
  H2R00_RS02485 - 472596..473204 (+) 609 WP_234113235.1 N-acetylmuramoyl-L-alanine amidase -
  H2R00_RS02490 - 473338..474063 (+) 726 WP_182070401.1 glycerophosphodiester phosphodiesterase -
  H2R00_RS02495 - 474118..474372 (-) 255 WP_154994135.1 DUF2627 domain-containing protein -

Sequence

Protein


Download         Length: 266 a.a.        Molecular weight: 29515.02 Da        Isoelectric Point: 6.6109

>NTDB_id=470041 H2R00_RS02470 WP_154994145.1 470042..470842(+) (spo0A) [Bacillus haynesii strain P19]
MEKIKVCVADDNRELVGLLSEYIEGQSDMEVLGVAYNGQECLSLFKDKEPDVLVLDIIMPHLDGLAVLERLRESQLKKQP
NVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLVGHIRQVSGNGSQLTHRAPSSQSSVLRPQAESPKKNLDASITTII
HEIGVPAHIKGYLYLREAISMVYNDIELLGSITKVLYPDIAKKFNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTVS
MSKAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 801 bp        

>NTDB_id=470041 H2R00_RS02470 WP_154994145.1 470042..470842(+) (spo0A) [Bacillus haynesii strain P19]
GTGGAGAAAATTAAAGTATGTGTTGCTGATGATAACAGGGAGCTTGTTGGCCTATTAAGCGAATATATCGAGGGACAAAG
CGACATGGAAGTGCTTGGTGTCGCATACAACGGACAGGAATGTCTTTCTTTGTTTAAAGACAAGGAGCCCGACGTGCTTG
TGCTTGATATTATCATGCCTCATCTCGACGGATTGGCCGTTCTTGAAAGGCTGAGGGAATCGCAGCTTAAAAAGCAGCCG
AATGTCATCATGCTGACGGCGTTCGGCCAGGAAGACGTGACGAAAAAAGCTGTAGATTTGGGCGCGTCGTATTTTATTTT
GAAACCTTTTGACATGGAGAACTTAGTCGGTCATATCCGCCAGGTCAGCGGAAACGGATCTCAATTGACACACCGTGCCC
CGTCTTCTCAAAGCAGTGTGCTTCGGCCGCAGGCGGAATCGCCGAAGAAAAACCTGGACGCCAGCATCACGACCATCATC
CACGAAATCGGCGTACCCGCTCATATAAAAGGCTATTTATACTTGAGAGAAGCCATCTCCATGGTGTATAACGACATCGA
ACTGCTCGGGAGCATTACAAAAGTGCTTTATCCGGATATCGCCAAAAAATTCAACACGACTGCAAGCCGCGTCGAACGGG
CGATTCGCCACGCCATCGAAGTCGCATGGAGCAGAGGCAACATCGACTCGATTTCGTCACTTTTCGGCTACACAGTCAGC
ATGTCAAAAGCAAAGCCGACCAATTCAGAATTCATCGCGATGGTCGCAGACAAGCTGAGACTGGAGCATAAGGCTTCTTA
A

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(6-119)

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(156-259)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

92.884

100

0.932