Detailed information
Bioinformatically predicted
Overview
| Name | dprB | Type | Machinery gene |
| Locus tag | HPIN_RS01525 | Genome accession | NC_017372 |
| Coordinates | 305602..306006 (+) | Length | 134 a.a. |
| NCBI ID | WP_000599262.1 | Uniprot ID | E8QEQ6 |
| Organism | Helicobacter pylori India7 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 300602..311006
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HPIN_RS01490 (HPIN_01500) | - | 300772..301710 (-) | 939 | WP_000833929.1 | tetraacyldisaccharide 4'-kinase | - |
| HPIN_RS01495 (HPIN_01505) | - | 301707..302489 (-) | 783 | WP_001168226.1 | NAD+ synthase | - |
| HPIN_RS01505 (HPIN_01510) | ilvC | 302738..303730 (+) | 993 | WP_001207740.1 | ketol-acid reductoisomerase | - |
| HPIN_RS01510 (HPIN_01515) | minD | 303755..304561 (+) | 807 | WP_001019061.1 | septum site-determining protein MinD | - |
| HPIN_RS01515 (HPIN_01520) | minE | 304558..304791 (+) | 234 | WP_000051424.1 | cell division topological specificity factor MinE | - |
| HPIN_RS01520 (HPIN_01525) | dprA | 304805..305605 (+) | 801 | WP_000840077.1 | DNA-processing protein DprA | Machinery gene |
| HPIN_RS01525 (HPIN_01530) | dprB | 305602..306006 (+) | 405 | WP_000599262.1 | Holliday junction resolvase RuvX | Machinery gene |
| HPIN_RS08880 | - | 306141..306341 (+) | 201 | WP_412081015.1 | sel1 repeat family protein | - |
| HPIN_RS08885 | - | 306409..306720 (+) | 312 | WP_412081016.1 | tetratricopeptide repeat protein | - |
| HPIN_RS01535 (HPIN_01550) | - | 306907..307212 (+) | 306 | WP_000699929.1 | hypothetical protein | - |
| HPIN_RS01540 (HPIN_01555) | - | 307196..307762 (+) | 567 | WP_000032371.1 | hypothetical protein | - |
| HPIN_RS01545 (HPIN_01560) | - | 307849..308730 (-) | 882 | WP_001117120.1 | RluA family pseudouridine synthase | - |
| HPIN_RS01550 (HPIN_01565) | recJ | 308730..310280 (-) | 1551 | WP_000810740.1 | single-stranded-DNA-specific exonuclease RecJ | - |
Sequence
Protein
Download Length: 134 a.a. Molecular weight: 15283.70 Da Isoelectric Point: 9.0345
>NTDB_id=46958 HPIN_RS01525 WP_000599262.1 305602..306006(+) (dprB) [Helicobacter pylori India7]
MILACDVGLKRIGIAVLLNGVILPLEAILRRNRNQASRDLSDLLREKNIQVLVVGKPNESYADTNARIEHFIKLVDFKGE
IVFINEDNSSVEAYENLEHLGNKNKRLAIKDGRLDSLSACRILERYYQQVLKKH
MILACDVGLKRIGIAVLLNGVILPLEAILRRNRNQASRDLSDLLREKNIQVLVVGKPNESYADTNARIEHFIKLVDFKGE
IVFINEDNSSVEAYENLEHLGNKNKRLAIKDGRLDSLSACRILERYYQQVLKKH
Nucleotide
Download Length: 405 bp
>NTDB_id=46958 HPIN_RS01525 WP_000599262.1 305602..306006(+) (dprB) [Helicobacter pylori India7]
GTGATTTTGGCATGCGATGTGGGGTTAAAACGCATTGGCATCGCTGTGCTTTTAAACGGCGTTATCTTGCCATTAGAAGC
GATTTTACGCCGCAACAGGAATCAGGCCTCTAGGGATTTGAGCGATTTGTTGAGGGAAAAAAACATTCAAGTGCTAGTGG
TGGGCAAGCCCAATGAAAGCTATGCGGACACGAACGCCCGCATTGAGCATTTTATCAAGCTTGTAGATTTTAAGGGCGAA
ATCGTTTTTATTAATGAAGATAATTCTAGCGTAGAAGCTTATGAAAATTTAGAGCATTTGGGCAATAAAAACAAGCGGCT
CGCTATTAAAGACGGCCGGTTAGACTCTTTGAGCGCTTGCAGGATTTTAGAACGCTATTATCAGCAGGTTTTAAAAAAGC
ACTAG
GTGATTTTGGCATGCGATGTGGGGTTAAAACGCATTGGCATCGCTGTGCTTTTAAACGGCGTTATCTTGCCATTAGAAGC
GATTTTACGCCGCAACAGGAATCAGGCCTCTAGGGATTTGAGCGATTTGTTGAGGGAAAAAAACATTCAAGTGCTAGTGG
TGGGCAAGCCCAATGAAAGCTATGCGGACACGAACGCCCGCATTGAGCATTTTATCAAGCTTGTAGATTTTAAGGGCGAA
ATCGTTTTTATTAATGAAGATAATTCTAGCGTAGAAGCTTATGAAAATTTAGAGCATTTGGGCAATAAAAACAAGCGGCT
CGCTATTAAAGACGGCCGGTTAGACTCTTTGAGCGCTTGCAGGATTTTAGAACGCTATTATCAGCAGGTTTTAAAAAAGC
ACTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| dprB | Helicobacter pylori 26695 |
93.284 |
100 |
0.933 |