Detailed information NTG0046947

Bioinformatically predicted

Overview

• Name: comH
• Type: Machinery gene
• Locus tag: HPGAM_RS07745
• Genome accession: NC_017371
• Coordinates: 1623564..1625003 (-)
• Length: 479 a.a.
• NCBI ID: WP_000748963.1
• Uniprot ID: -
• Organism: Helicobacter pylori Gambia94/24
• Function: import of DNA into the periplasm (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1618564..1630003

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HPGAM_RS07720 (HPGAM_08030)	recG	1619710..1621581 (-)	1872	WP_014536031.1	ATP-dependent DNA helicase RecG	-
HPGAM_RS07725 (HPGAM_08035)	-	1621658..1621996 (+)	339	WP_000837067.1	hypothetical protein	-
HPGAM_RS07730 (HPGAM_08040)	-	1622000..1622635 (+)	636	WP_000668045.1	outer membrane protein	-
HPGAM_RS07735 (HPGAM_08045)	-	1622632..1623384 (-)	753	WP_000767515.1	exodeoxyribonuclease III	-
HPGAM_RS07745 (HPGAM_08055)	comH	1623564..1625003 (-)	1440	WP_000748963.1	hypothetical protein	Machinery gene
HPGAM_RS07755 (HPGAM_08060)	dnaA	1625232..1626605 (-)	1374	WP_000380660.1	chromosomal replication initiator protein DnaA	-
HPGAM_RS07760 (HPGAM_08065)	-	1626757..1627299 (+)	543	WP_000923007.1	hypothetical protein	-
HPGAM_RS07765 (HPGAM_08070)	-	1627334..1627573 (+)	240	WP_000461837.1	DUF2443 domain-containing protein	-
HPGAM_RS07770 (HPGAM_08075)	glmS	1627574..1629367 (+)	1794	WP_000334336.1	glutamine--fructose-6-phosphate transaminase (isomerizing)	-

Sequence

Protein

• Length: 479 a.a.
• Molecular weight: 54557.44 Da
• Isoelectric Point: 7.0706

>NTDB_id=46947 HPGAM_RS07745 WP_000748963.1 1623564..1625003(-) (comH) [Helicobacter pylori Gambia94/24]
MKKSLCLSFFLTFSNPLQALVIELLEEIKTSPHKGTFKAKVLDSKEPKQVLGVYNISSNKKLTLTITHISTAIVYQPLDE
KLSLETTLSPNRPTIPRNTQIVFSSKELKEPHSNPIPSLNAPMQKPQNKPSSSQQSPQNFSYPESKLGSKNSKNSLLQPL
VTPSKISPANEVKTPTNDANPPLKHSSQDQENNLFVVPPTEKTLPNNTPNADASENNESNENRDNVEKQAIRDPNIKEFA
CGKWVYDDENLQAYRPSILKRVDKDKEVTTDITPCDYSTAENKSGKIITPYTKISVHKTEPLEDPQTFEAKNNFAILQAR
SSTEKCKRARARKDGTTRQCYLIEEPLKQAWESEYEITTQLVKAVYERPKQDDQTEPTFYETSELAYSSTRKSEITRNEL
NLNEKFMEFVEVYEGHYLNDIIKESSEYKEWVKNHVRFKEGVCMALEIEEQPRAKSTPLSIENSRVVCVKKGNYLFNEV

Nucleotide

• Length: 1440 bp

>NTDB_id=46947 HPGAM_RS07745 WP_000748963.1 1623564..1625003(-) (comH) [Helicobacter pylori Gambia94/24]
ATGAAAAAATCCCTTTGTTTGTCTTTCTTTCTGACCTTCTCTAACCCTCTTCAAGCCCTTGTCATTGAGCTTTTAGAAGA
GATCAAAACTTCGCCGCATAAAGGCACTTTTAAGGCTAAAGTCCTTGATTCTAAAGAACCCAAACAAGTTTTGGGCGTTT
ATAATATCTCCTCAAACAAAAAACTCACGCTCACTATCACCCACATATCCACCGCAATCGTTTATCAACCCCTTGATGAA
AAACTTTCTTTAGAAACGACCTTAAGCCCTAACCGCCCTACTATCCCTAGAAACACCCAAATCGTTTTTTCTTCAAAGGA
ATTGAAAGAGCCACACTCAAACCCAATACCTTCTTTAAACGCGCCCATGCAAAAACCACAAAACAAACCCAGCTCATCGC
AACAATCCCCTCAAAACTTTTCTTACCCAGAGTCCAAACTAGGCTCTAAAAACTCTAAAAACAGCCTTTTACAGCCCTTA
GTAACTCCTAGCAAAATAAGCCCTGCTAATGAAGTTAAAACGCCAACAAACGACGCTAATCCCCCTTTAAAGCATTCTTC
ACAAGATCAAGAAAACAATCTCTTTGTAGTGCCACCCACTGAAAAAACGCTCCCTAACAACACCCCTAATGCTGATGCGA
GTGAAAACAATGAAAGCAACGAAAATAGGGACAATGTGGAAAAACAAGCGATTAGAGATCCTAATATCAAAGAATTCGCA
TGCGGGAAGTGGGTTTATGATGATGAAAATTTACAAGCCTATCGCCCAAGCATTTTAAAACGCGTTGATAAAGACAAAGA
GGTTACAACAGACATTACCCCTTGCGATTACAGCACTGCTGAAAATAAAAGCGGTAAGATCATTACCCCCTATACTAAAA
TCTCTGTTCATAAAACAGAGCCTTTAGAAGACCCTCAAACTTTTGAAGCTAAAAACAATTTCGCCATTCTCCAAGCCAGA
AGCTCTACAGAAAAGTGTAAAAGGGCTAGAGCGAGAAAAGACGGCACGACCAGACAATGCTATCTGATAGAAGAGCCTTT
AAAACAAGCATGGGAGAGCGAGTATGAAATCACCACGCAATTAGTGAAAGCCGTATATGAACGCCCTAAACAAGACGACC
AAACAGAGCCGACTTTTTATGAAACCAGCGAATTGGCTTATTCTTCCACACGAAAAAGCGAAATAACGCGCAATGAATTG
AATTTGAATGAAAAATTCATGGAATTTGTGGAAGTGTATGAGGGGCATTATTTAAACGATATAATCAAAGAGAGCAGCGA
ATATAAAGAATGGGTTAAAAACCATGTGCGCTTTAAAGAAGGAGTGTGCATGGCCTTAGAAATAGAAGAGCAACCACGAG
CCAAAAGCACGCCTTTGAGCATTGAAAACTCTCGTGTTGTGTGTGTCAAAAAGGGGAATTATTTATTCAACGAAGTTTGA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comH	Helicobacter pylori 26695	92.276	100	0.923