Detailed information    

insolico Bioinformatically predicted

Overview

Name   nin/comJ   Type   Regulator
Locus tag   H1Q60_RS11435 Genome accession   NZ_CP059405
Coordinates   2211062..2211460 (-) Length   132 a.a.
NCBI ID   WP_017419379.1    Uniprot ID   -
Organism   Bacillus velezensis strain MV2     
Function   represses the expression of nucA (predicted from homology)   
Competence regulation

Genomic Context

Location: 2206062..2216460
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H1Q60_RS11410 (H1Q60_11410) - 2206244..2207446 (+) 1203 WP_014416870.1 GTP-binding protein -
  H1Q60_RS11415 (H1Q60_11415) - 2207511..2208647 (+) 1137 WP_007609290.1 zinc-dependent alcohol dehydrogenase -
  H1Q60_RS11420 (H1Q60_11420) - 2208662..2209096 (+) 435 WP_014416871.1 RDD family protein -
  H1Q60_RS11425 (H1Q60_11425) - 2209168..2209491 (+) 324 WP_007409357.1 YckD family protein -
  H1Q60_RS11430 (H1Q60_11430) - 2209595..2211043 (+) 1449 Protein_2220 family 1 glycosylhydrolase -
  H1Q60_RS11435 (H1Q60_11435) nin/comJ 2211062..2211460 (-) 399 WP_017419379.1 competence protein ComJ Regulator
  H1Q60_RS11440 (H1Q60_11440) nucA/comI 2211481..2211918 (-) 438 WP_003156588.1 NucA/NucB deoxyribonuclease domain-containing protein Machinery gene
  H1Q60_RS11445 (H1Q60_11445) hxlB 2212249..2212806 (-) 558 WP_065180943.1 6-phospho-3-hexuloisomerase -
  H1Q60_RS11450 (H1Q60_11450) hxlA 2212803..2213438 (-) 636 WP_015239130.1 3-hexulose-6-phosphate synthase -
  H1Q60_RS11455 (H1Q60_11455) - 2213670..2214032 (+) 363 WP_007409352.1 helix-turn-helix domain-containing protein -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 14893.89 Da        Isoelectric Point: 4.7846

>NTDB_id=469444 H1Q60_RS11435 WP_017419379.1 2211062..2211460(-) (nin/comJ) [Bacillus velezensis strain MV2]
MIKSWKPQELAISYHQFTLFQKDSEPPVIDWTDEAIEKGYAEADGAVSFEARRNTRAFIVLRLNTSEPVPSYEKKATVPF
EAVKDGIEIESVMSKRLSFNIPKGRYSLTCYSVPAEISDLHADTYIIDAAAM

Nucleotide


Download         Length: 399 bp        

>NTDB_id=469444 H1Q60_RS11435 WP_017419379.1 2211062..2211460(-) (nin/comJ) [Bacillus velezensis strain MV2]
TTGATTAAATCATGGAAACCGCAAGAACTGGCCATTTCTTATCATCAATTTACACTCTTTCAAAAAGATTCAGAACCGCC
TGTTATCGATTGGACCGATGAAGCCATTGAAAAAGGATATGCGGAAGCTGACGGAGCTGTTTCATTTGAAGCAAGGAGAA
ATACGAGGGCATTTATCGTCCTCAGGCTTAACACAAGTGAACCGGTACCATCCTATGAGAAAAAAGCGACTGTTCCCTTT
GAGGCTGTAAAAGATGGAATTGAGATTGAAAGCGTGATGTCAAAGCGGCTTTCTTTTAATATTCCGAAAGGCCGATACAG
CCTTACCTGTTATTCAGTGCCTGCCGAAATATCCGATCTTCATGCGGATACGTATATTATTGATGCAGCCGCAATGTAA

Domains

Predicted by InterproScan.

Competence protein J (ComJ) (ComJ)

(9-129)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nin/comJ Bacillus subtilis subsp. subtilis str. 168

76.515

100

0.765