Detailed information    

insolico Bioinformatically predicted

Overview


Name   comQ   Type   Regulator
Locus tag   H1Q60_RS04750 Genome accession   NZ_CP059405
Coordinates   902873..903859 (-) Length   328 a.a.
NCBI ID   WP_269321599.1    Uniprot ID   -
Organism   Bacillus velezensis strain MV2     
Function   modification of ComX; production of ComX (predicted from homology)   
Competence regulation

Genomic Context


Location: 897873..908859
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H1Q60_RS04715 (H1Q60_04715) - 898129..898605 (+) 477 WP_129093768.1 Na+/H+ antiporter subunit E -
  H1Q60_RS04720 (H1Q60_04720) - 898605..898889 (+) 285 WP_012118311.1 Na(+)/H(+) antiporter subunit F1 -
  H1Q60_RS04725 (H1Q60_04725) mnhG 898873..899247 (+) 375 WP_003152056.1 monovalent cation/H(+) antiporter subunit G -
  H1Q60_RS04730 (H1Q60_04730) - 899287..899670 (-) 384 WP_003152054.1 hotdog fold thioesterase -
  H1Q60_RS04735 (H1Q60_04735) comA 899692..900336 (-) 645 WP_129093769.1 response regulator transcription factor Regulator
  H1Q60_RS04740 (H1Q60_04740) comP 900417..902720 (-) 2304 WP_070082286.1 histidine kinase Regulator
  H1Q60_RS04745 (H1Q60_04745) comX 902740..902919 (-) 180 WP_318010531.1 competence pheromone ComX -
  H1Q60_RS04750 (H1Q60_04750) comQ 902873..903859 (-) 987 WP_269321599.1 class 1 isoprenoid biosynthesis enzyme Regulator
  H1Q60_RS04755 (H1Q60_04755) degQ 903990..904130 (-) 141 WP_003152043.1 degradation enzyme regulation protein DegQ Regulator
  H1Q60_RS04760 (H1Q60_04760) - 904587..904928 (+) 342 WP_181816577.1 hypothetical protein -
  H1Q60_RS04765 (H1Q60_04765) - 904935..906158 (-) 1224 WP_181816578.1 EAL and HDOD domain-containing protein -
  H1Q60_RS04770 (H1Q60_04770) - 906288..907754 (-) 1467 WP_106067969.1 nicotinate phosphoribosyltransferase -
  H1Q60_RS04775 (H1Q60_04775) - 907772..908323 (-) 552 WP_025853916.1 isochorismatase family cysteine hydrolase -
  H1Q60_RS04780 (H1Q60_04780) - 908420..908818 (-) 399 WP_003152031.1 DUF1694 domain-containing protein -

Sequence


Protein


Download         Length: 328 a.a.        Molecular weight: 37795.36 Da        Isoelectric Point: 5.6937

>NTDB_id=469423 H1Q60_RS04750 WP_269321599.1 902873..903859(-) (comQ) [Bacillus velezensis strain MV2]
MKTIIEQMCLDANQIKNRMKSIIERNIFNEHLMQLLLRFIEPKKNFSLAESAVLHYVIFDGENQETAVNLGAAIEILTLT
SDIIDDLEDEDNRDAPWMKIDRSLALSAAFSLYTAGLQSINSISTNPLVIKYVLKYIQDAMQGQHDDLINKPETEDECLE
VIKLKCGSLFALANVTGTLLATGEFNKSVESYSYYKGIFEQISGDYHAIFKDNTSDILKDKHTLINLYLKRLFNKSSQEL
LRIFSDQKLYSQLRLNKKEFIQKLYDSGASQYVSVLYQLYMHKCGTEVENLNLDIKKIKIIKKHLLNNKNNKKDDEDAEF
NKLFFELS

Nucleotide


Download         Length: 987 bp        

>NTDB_id=469423 H1Q60_RS04750 WP_269321599.1 902873..903859(-) (comQ) [Bacillus velezensis strain MV2]
GTGAAGACAATTATTGAGCAAATGTGTTTAGATGCCAACCAAATCAAGAATAGAATGAAGAGTATAATAGAGCGGAACAT
ATTTAATGAACATCTAATGCAGCTCCTTCTTCGTTTTATTGAACCAAAAAAAAATTTTTCTCTAGCTGAATCAGCTGTTT
TGCATTATGTGATCTTTGACGGCGAAAATCAAGAAACCGCAGTGAACTTAGGTGCCGCTATTGAAATTCTTACACTTACT
TCCGATATAATTGATGATCTGGAAGATGAGGATAATCGAGATGCTCCTTGGATGAAGATAGATCGTTCACTAGCATTAAG
TGCAGCATTTTCATTATACACAGCAGGATTGCAAAGCATTAATTCGATTAGTACGAATCCTTTAGTGATTAAGTATGTAT
TAAAATATATTCAAGATGCAATGCAGGGTCAACATGATGATTTGATCAATAAACCAGAGACAGAAGATGAATGTTTAGAG
GTAATCAAGTTAAAATGCGGAAGTTTATTTGCGTTAGCAAATGTTACTGGTACGCTTTTAGCAACTGGAGAATTCAATAA
GTCTGTTGAAAGTTATTCCTATTATAAAGGGATATTTGAACAAATTTCCGGTGATTATCATGCTATTTTTAAGGATAATA
CTAGTGATATTCTGAAAGATAAACATACATTGATTAATTTATATCTTAAGCGCTTGTTTAATAAGTCTTCTCAAGAATTG
CTTCGTATATTCTCAGATCAAAAATTATATTCGCAACTGCGGCTTAATAAAAAAGAGTTTATTCAAAAGCTGTATGATTC
TGGAGCATCTCAATATGTTTCGGTTTTATACCAACTATACATGCATAAGTGTGGAACTGAAGTTGAAAATTTAAATTTAG
ATATAAAGAAGATAAAAATAATAAAAAAACACTTGTTGAATAATAAGAATAATAAGAAGGATGATGAAGATGCAGAATTT
AATAAATTATTTTTTGAATTATCCTGA

Domains


Predicted by InterproScan.

(59-245)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comQ Bacillus subtilis subsp. subtilis str. 168

61.246

88.11

0.54