Detailed information    

insolico Bioinformatically predicted

Overview

Name   comFC   Type   Machinery gene
Locus tag   FOLKNPGA_RS03150 Genome accession   NZ_CP059400
Coordinates   730876..731580 (-) Length   234 a.a.
NCBI ID   WP_370529179.1    Uniprot ID   A0A7G3ZX56
Organism   Legionella sp. PC1000     
Function   ssDNA transport into the cell (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 725876..736580
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FOLKNPGA_RS03125 (FOLKNPGA_00640) prfA 726248..727336 (-) 1089 WP_182351710.1 peptide chain release factor 1 -
  FOLKNPGA_RS03130 (FOLKNPGA_00641) hemA 727320..728594 (-) 1275 WP_182351711.1 glutamyl-tRNA reductase -
  FOLKNPGA_RS03135 (FOLKNPGA_00642) - 728867..729148 (+) 282 WP_182351712.1 hypothetical protein -
  FOLKNPGA_RS03140 (FOLKNPGA_00643) - 729160..730224 (+) 1065 WP_182351713.1 RIP metalloprotease -
  FOLKNPGA_RS03145 (FOLKNPGA_00644) - 730438..730803 (+) 366 WP_182351714.1 hypothetical protein -
  FOLKNPGA_RS03150 (FOLKNPGA_00645) comFC 730876..731580 (-) 705 WP_370529179.1 ComF family protein Machinery gene
  FOLKNPGA_RS03155 (FOLKNPGA_00646) bioC 731617..732474 (+) 858 WP_182351715.1 malonyl-ACP O-methyltransferase BioC -
  FOLKNPGA_RS03160 (FOLKNPGA_00647) - 732480..733892 (-) 1413 WP_182351716.1 deoxyribodipyrimidine photo-lyase -
  FOLKNPGA_RS03165 (FOLKNPGA_00648) - 733983..734867 (-) 885 WP_182351717.1 polyprenyl synthetase family protein -
  FOLKNPGA_RS03170 (FOLKNPGA_00649) - 734872..735078 (-) 207 WP_182351718.1 exodeoxyribonuclease VII small subunit -

Sequence

Protein


Download         Length: 234 a.a.        Molecular weight: 26857.75 Da        Isoelectric Point: 9.7123

>NTDB_id=469367 FOLKNPGA_RS03150 WP_370529179.1 730876..731580(-) (comFC) [Legionella sp. PC1000]
MRQKIWSLTQSLRLYSICVLCNQFHHSKMAVCTSCIEFMTRLGPACHYCAYPLPDIHLFVCGRCIKKTPYFDRALINYVF
EEPLRNLLHQFKYRNGLYLGSFLSQLMVHSLPKDEVMPQCLIPVPMHPQRIKSRGFNQAAVLVRLLAKKLQLPYDLTSCQ
KILNTEPQASLDGEQRQKNLRHAFNVKKIPWHHVAIVDDLLTTGSTANELAFTLKKSGVKKVDVWCCARAVGKL

Nucleotide


Download         Length: 705 bp        

>NTDB_id=469367 FOLKNPGA_RS03150 WP_370529179.1 730876..731580(-) (comFC) [Legionella sp. PC1000]
GTGCGCCAGAAAATATGGAGTTTAACACAAAGTTTACGCTTGTACTCAATATGTGTTTTATGCAATCAGTTTCATCACAG
CAAAATGGCAGTATGCACCTCGTGTATTGAGTTCATGACCCGCTTAGGTCCCGCCTGCCACTACTGCGCATATCCTTTGC
CCGATATTCATCTGTTTGTCTGTGGGCGTTGTATTAAAAAAACACCTTATTTTGATCGCGCACTCATTAATTACGTCTTT
GAAGAGCCTCTACGCAATCTTTTGCATCAATTTAAATACCGCAATGGTCTTTATCTAGGATCTTTTTTAAGTCAATTAAT
GGTTCACTCACTGCCAAAGGATGAAGTTATGCCTCAATGTTTAATCCCCGTCCCTATGCATCCACAACGCATTAAGTCGC
GCGGATTTAACCAAGCAGCAGTTTTAGTTCGATTACTCGCAAAAAAATTACAGTTACCTTACGACTTAACCAGTTGTCAA
AAAATCCTTAATACGGAGCCCCAAGCAAGTCTTGACGGCGAACAAAGACAAAAAAATTTACGTCATGCATTTAACGTCAA
AAAAATTCCCTGGCACCATGTAGCAATTGTTGATGATCTCTTAACTACGGGCAGCACAGCCAATGAGCTGGCATTCACTT
TAAAGAAATCGGGGGTAAAAAAAGTAGATGTATGGTGTTGCGCCCGAGCCGTGGGTAAATTATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7G3ZX56

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comFC Legionella pneumophila str. Paris

66.953

99.573

0.667
  comFC Legionella pneumophila strain ERS1305867

67.179

83.333

0.56