Detailed information NTG0468893

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: HU024_RS14700
• Genome accession: NZ_CP059344
• Coordinates: 3009925..3011073 (-)
• Length: 382 a.a.
• NCBI ID: WP_007410270.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain K01
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3004925..3016073

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HU024_RS14670 (HU024_14670)	-	3005061..3005819 (-)	759	WP_007609404.1	ABC transporter ATP-binding protein	-
HU024_RS14675 (HU024_14675)	-	3005813..3006760 (-)	948	WP_014416905.1	iron chelate uptake ABC transporter family permease subunit	-
HU024_RS14680 (HU024_14680)	ceuB	3006750..3007703 (-)	954	WP_032872883.1	ABC transporter permease	Machinery gene
HU024_RS14685 (HU024_14685)	-	3008117..3009481 (+)	1365	WP_007609394.1	aspartate kinase	-
HU024_RS14690 (HU024_14690)	-	3009561..3009671 (+)	111	WP_369878517.1	YjcZ family sporulation protein	-
HU024_RS14695 (HU024_14695)	phrC	3009822..3009941 (-)	120	WP_003156334.1	PhrC/PhrF family phosphatase-inhibitory pheromone	Regulator
HU024_RS14700 (HU024_14700)	rapC	3009925..3011073 (-)	1149	WP_007410270.1	Rap family tetratricopeptide repeat protein	Regulator
HU024_RS14705 (HU024_14705)	-	3011226..3012659 (-)	1434	WP_161503657.1	HAMP domain-containing sensor histidine kinase	-
HU024_RS14710 (HU024_14710)	-	3012646..3013329 (-)	684	WP_032872879.1	response regulator transcription factor	-
HU024_RS14715 (HU024_14715)	-	3013542..3014972 (+)	1431	WP_032872876.1	ABC transporter permease	-
HU024_RS14720 (HU024_14720)	-	3014987..3015670 (+)	684	WP_032872874.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45475.70 Da
• Isoelectric Point: 4.9916

>NTDB_id=468893 HU024_RS14700 WP_007410270.1 3009925..3011073(-) (rapC) [Bacillus velezensis strain K01]
MKSGLIPSSAVGQKINEWYRYIRTFSVPDAEILKAEIKQELDHMEPDSNLVLYYSLMEFRHQLMLDYLEPLEKLKIEDQP
TLSEILDNIDNSQAGLKGLLDYYVNFFKGMFEFDKREFISAITYYKQAEKKLAFVSDHVERAEFYFKVAEAYYHMKQTYF
SLIHIKNAYEIYVEQDTYNVRIIQCHFVFGVNLMDERRFEQAAKHFQHALQMAEKEQKAQLVGRALYNLGLCYYNQDRIG
EAIPYFERAVDTFESQRIVNSLPQAYFLITLIYFKLGKKEKASEYHKRGYEYAKETDDPVYTVKFEWLQALYQAKPDEET
ISACFRYLEDKNLYADIEDLALEAAKYYYEQNCFKISSDYFLKVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=468893 HU024_RS14700 WP_007410270.1 3009925..3011073(-) (rapC) [Bacillus velezensis strain K01]
ATGAAGAGCGGGTTAATTCCTTCTTCAGCAGTCGGGCAGAAAATTAACGAGTGGTACCGATACATCAGAACATTCAGCGT
GCCGGATGCGGAGATCTTGAAGGCCGAGATCAAACAAGAGCTTGACCATATGGAGCCTGATTCGAACTTAGTGCTTTATT
ATTCCCTCATGGAATTTCGCCATCAGCTGATGCTGGACTACTTGGAGCCGCTGGAAAAACTGAAGATAGAAGACCAGCCG
ACCCTGTCGGAAATTCTTGATAACATTGATAACAGCCAGGCCGGCCTCAAGGGGCTTCTCGATTATTACGTCAATTTTTT
CAAAGGCATGTTTGAATTTGATAAAAGAGAATTTATCTCAGCGATTACATATTATAAACAAGCTGAGAAAAAACTGGCCT
TCGTATCGGACCATGTGGAACGGGCGGAGTTTTATTTTAAAGTGGCCGAAGCTTATTATCATATGAAACAAACGTATTTT
TCTTTGATACATATAAAAAACGCTTATGAAATTTACGTGGAGCAGGACACATATAACGTCCGGATTATTCAATGCCATTT
TGTATTCGGCGTCAATTTAATGGATGAAAGGCGCTTTGAACAGGCGGCCAAACATTTTCAGCACGCTCTGCAAATGGCCG
AAAAAGAACAAAAAGCGCAGCTTGTCGGGAGGGCGCTGTATAACCTCGGACTGTGCTACTACAATCAGGACCGCATCGGC
GAAGCGATTCCGTACTTTGAACGGGCGGTTGATACATTTGAATCACAAAGAATCGTCAATTCTCTTCCTCAAGCATATTT
TCTAATCACACTCATTTACTTTAAACTCGGAAAAAAAGAAAAAGCGTCGGAATATCACAAGCGGGGATATGAATATGCTA
AAGAAACAGACGATCCCGTTTACACGGTAAAATTCGAATGGCTGCAGGCTCTGTATCAGGCGAAACCGGATGAGGAAACA
ATCAGCGCGTGTTTCCGTTACCTGGAAGATAAAAATTTATACGCCGATATAGAGGATTTAGCACTAGAAGCAGCTAAATA
TTACTATGAACAAAATTGCTTTAAGATTTCTTCTGACTATTTTCTGAAAGTCGAAGAGGCAAGGAAACAAATACAAAGGA
GTGAGGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (6-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	82.461	100	0.825
rapF	Bacillus subtilis subsp. subtilis str. 168	57.105	99.476	0.568