Detailed information NTG0046885

Bioinformatically predicted

Overview

• Name: comH
• Type: Machinery gene
• Locus tag: HPF32_RS07300
• Genome accession: NC_017366
• Coordinates: 1494683..1496122 (-)
• Length: 479 a.a.
• NCBI ID: WP_000751639.1
• Uniprot ID: -
• Organism: Helicobacter pylori F32
• Function: import of DNA into the periplasm (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1489683..1501122

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HPF32_RS07275 (HPF32_1409)	recG	1490815..1492680 (-)	1866	WP_001158356.1	ATP-dependent DNA helicase RecG	-
HPF32_RS07280 (HPF32_1410)	-	1492762..1493115 (+)	354	WP_000836983.1	hypothetical protein	-
HPF32_RS07285 (HPF32_1411)	-	1493119..1493754 (+)	636	WP_000668051.1	outer membrane protein	-
HPF32_RS07290 (HPF32_1412)	-	1493751..1494503 (-)	753	WP_000767567.1	exodeoxyribonuclease III	-
HPF32_RS07300 (HPF32_1413)	comH	1494683..1496122 (-)	1440	WP_000751639.1	hypothetical protein	Machinery gene
HPF32_RS07305 (HPF32_1414)	dnaA	1496342..1497709 (-)	1368	WP_000380594.1	chromosomal replication initiator protein DnaA	-
HPF32_RS07310 (HPF32_1415)	-	1497863..1498405 (+)	543	WP_000922941.1	purine-nucleoside phosphorylase	-
HPF32_RS07315 (HPF32_1416)	-	1498441..1498680 (+)	240	WP_000461845.1	DUF2443 domain-containing protein	-
HPF32_RS07320 (HPF32_1417)	glmS	1498681..1500474 (+)	1794	WP_000334410.1	glutamine--fructose-6-phosphate transaminase (isomerizing)	-
HPF32_RS07325 (HPF32_1418)	thyX	1500495..1501121 (+)	627	WP_000451938.1	FAD-dependent thymidylate synthase	-

Sequence

Protein

• Length: 479 a.a.
• Molecular weight: 54906.80 Da
• Isoelectric Point: 7.4582

>NTDB_id=46885 HPF32_RS07300 WP_000751639.1 1494683..1496122(-) (comH) [Helicobacter pylori F32]
MKKTLCLSFFLTFSNPLQALVIELLEEIKTSPHKGTFKAKILDSKEPRQVLGVYNISPHKKLTLTITHISTAIVYQPLDE
KLSLETTLNPNRPTIPRNTQIVFSSKELKESHPHQMPSLNAPIQKPQNKPTSSQQSLQNFSYPESKLGSKNPKNSLLQPL
ATPNKISSANEVKTPTNDTKPPLKHSSEDQENNLFVAPPTEKTLPNNNTNANINEHHESNENRDNGEKQAIRDPNIKEFA
CGKWVYDDENLQAYRPSILKRVDEDKQTATDITPCDYSNAENKSGKITTPYTKISVHKTEPLEEPQTFEAKNNFTILQAR
SSTEKCKRARARKDGTIRQCYLIEEPLKQAWESEYQITTQLVKATYERPKQDDQTEPTFYETSELAYSSTRKSEITRNEL
NLNEKFMEFVEVYEGHYLNDIVKESSEYKEWVKNHVRFKEGVCMVLEIEEQPRAKSTPLSIENSRVVCVKKGNYLFNEV

Nucleotide

• Length: 1440 bp

>NTDB_id=46885 HPF32_RS07300 WP_000751639.1 1494683..1496122(-) (comH) [Helicobacter pylori F32]
ATGAAAAAAACCCTTTGTCTGTCTTTCTTTCTGACTTTCTCTAACCCTCTTCAAGCCCTTGTGATCGAGCTTTTAGAAGA
AATCAAAACTTCGCCGCATAAAGGCACTTTTAAGGCTAAAATCCTTGATTCTAAAGAACCAAGACAAGTTTTAGGCGTTT
ATAATATCTCCCCACACAAAAAACTCACGCTCACTATCACCCACATATCCACTGCAATTGTCTATCAACCCCTTGATGAA
AAACTTTCTTTAGAAACGACCTTAAACCCTAACCGCCCTACTATTCCTAGAAATACCCAAATTGTTTTTTCTTCAAAAGA
ATTGAAAGAGTCACACCCACACCAAATGCCTTCTTTAAACGCGCCCATACAAAAACCACAAAACAAACCCACTTCATCGC
AACAATCTCTTCAAAACTTTTCTTACCCAGAGTCCAAACTAGGCTCTAAAAACCCTAAAAACAGCCTTTTACAGCCTTTA
GCCACTCCTAATAAAATAAGCTCCGCTAATGAAGTTAAAACGCCAACAAACGACACTAAACCCCCTTTAAAGCATTCTTC
AGAAGATCAAGAAAACAACCTCTTTGTAGCGCCACCCACTGAAAAAACGCTCCCTAACAACAACACTAACGCTAATATTA
ATGAACACCATGAAAGCAATGAAAATAGGGATAATGGGGAAAAACAAGCCATTAGAGATCCTAATATCAAAGAATTTGCA
TGCGGGAAGTGGGTTTATGATGATGAAAATTTACAAGCCTATCGCCCAAGCATTTTAAAACGCGTTGATGAAGACAAACA
GACTGCGACAGACATTACCCCTTGCGACTACAGCAACGCTGAAAATAAAAGCGGTAAAATCACTACCCCCTATACTAAAA
TCTCTGTTCATAAAACAGAGCCTTTAGAAGAGCCGCAAACTTTTGAAGCTAAAAACAATTTTACCATTCTCCAAGCCAGA
AGCTCTACAGAAAAATGCAAAAGGGCCAGAGCGCGAAAAGACGGCACGATTAGGCAATGCTATCTCATAGAAGAGCCTTT
AAAACAAGCGTGGGAGAGCGAGTATCAAATCACCACGCAATTAGTGAAAGCCACTTATGAGCGCCCCAAACAAGACGATC
AAACAGAGCCAACTTTTTATGAAACCAGCGAATTGGCTTATTCTTCCACACGAAAAAGTGAAATAACACGCAATGAATTG
AATTTGAATGAAAAGTTCATGGAATTTGTGGAAGTGTATGAGGGGCATTATTTAAACGATATAGTCAAAGAAAGCAGTGA
ATACAAAGAATGGGTTAAAAACCATGTGCGCTTTAAAGAAGGGGTGTGCATGGTTTTAGAAATAGAAGAGCAGCCACGAG
CCAAAAGCACGCCTTTGAGTATTGAAAACTCTCGTGTGGTGTGTGTCAAAAAGGGGAATTATTTATTTAACGAAGTTTAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comH	Helicobacter pylori 26695	92.276	100	0.923