Detailed information NTG0046875

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: HPF32_RS04980
• Genome accession: NC_017366
• Coordinates: 1043633..1044433 (-)
• Length: 266 a.a.
• NCBI ID: WP_000841119.1
• Uniprot ID: -
• Organism: Helicobacter pylori F32
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1038633..1049433

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HPF32_RS04935 (HPF32_0964)	-	1039249..1040034 (-)	786	WP_000488072.1	hypothetical protein	-
HPF32_RS07970	-	1040034..1040415 (-)	382	Protein_956	DUF1294 domain-containing protein	-
HPF32_RS04945	-	1040553..1040705 (-)	153	WP_232501016.1	hypothetical protein	-
HPF32_RS08485 (HPF32_0965)	-	1040755..1041022 (-)	268	Protein_958	lysozyme	-
HPF32_RS04955 (HPF32_0967)	-	1041455..1042015 (-)	561	WP_000037135.1	hypothetical protein	-
HPF32_RS04960 (HPF32_0968)	-	1041999..1042337 (-)	339	WP_000699911.1	hypothetical protein	-
HPF32_RS08560	-	1042526..1042857 (-)	332	Protein_961	tetratricopeptide repeat protein	-
HPF32_RS08565 (HPF32_0969)	-	1042824..1043174 (-)	351	WP_014535439.1	tetratricopeptide repeat protein	-
HPF32_RS04975 (HPF32_0970)	dprB	1043232..1043636 (-)	405	WP_000599205.1	Holliday junction resolvase RuvX	Machinery gene
HPF32_RS04980 (HPF32_0971)	dprA	1043633..1044433 (-)	801	WP_000841119.1	DNA-processing protein DprA	Machinery gene
HPF32_RS04985 (HPF32_0972)	minE	1044445..1044678 (-)	234	WP_000051412.1	cell division topological specificity factor MinE	-
HPF32_RS04990 (HPF32_0973)	minD	1044675..1045481 (-)	807	WP_001029114.1	septum site-determining protein MinD	-
HPF32_RS04995 (HPF32_0974)	ilvC	1045500..1046492 (-)	993	WP_001207567.1	ketol-acid reductoisomerase	-
HPF32_RS05005 (HPF32_0975)	-	1046743..1047525 (+)	783	WP_001168213.1	NAD+ synthase	-
HPF32_RS05010 (HPF32_0976)	-	1047522..1048460 (+)	939	WP_000833958.1	tetraacyldisaccharide 4'-kinase	-
HPF32_RS05015 (HPF32_0977)	pseH	1048393..1048935 (-)	543	WP_000742680.1	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase	-

Sequence

Protein

• Length: 266 a.a.
• Molecular weight: 29827.75 Da
• Isoelectric Point: 9.1549

>NTDB_id=46875 HPF32_RS04980 WP_000841119.1 1043633..1044433(-) (dprA) [Helicobacter pylori F32]
MKSNFQYSALENIPKAFDTLKDPPKKLYCVGDTKLLRAPLKVAIIGTRRPTPYSKQHTITLARELAKNGAVIVSGGALGV
DIIAQENALPKTIMLSPCSLDFIYPTNNHKVIQEIAQNGLILSEYEKDFMPVKGSFLARNRLVIALSDAVIIPQADLKSG
SMSSARLAQKYQKPLFVLPQRLNESDGTNELLEKGQAQGIFNIQNFINTLLKDHHLKEMPEIKDEFLEYCAKNPSYEEAY
LKFGDKLLEYELLGKIKRINHIVVLV

Nucleotide

• Length: 801 bp

>NTDB_id=46875 HPF32_RS04980 WP_000841119.1 1043633..1044433(-) (dprA) [Helicobacter pylori F32]
ATGAAAAGCAATTTCCAATACAGCGCGCTAGAGAATATCCCTAAAGCCTTTGATACGCTCAAAGACCCCCCTAAAAAGCT
CTATTGTGTGGGCGATACAAAGCTTTTGAGAGCACCTTTAAAAGTGGCTATCATCGGCACGAGAAGACCTACCCCTTATA
GCAAGCAACACACGATCACTCTAGCCAGAGAGCTTGCTAAAAATGGCGCGGTTATTGTGAGCGGAGGAGCGTTAGGCGTG
GATATTATCGCTCAAGAAAACGCCTTACCAAAAACCATCATGCTTTCGCCCTGCAGTTTGGATTTTATCTATCCTACGAA
CAACCATAAAGTGATCCAAGAAATCGCGCAAAACGGCTTGATTTTAAGCGAATATGAAAAGGATTTTATGCCCGTTAAAG
GCTCTTTTTTAGCCAGAAATCGCCTGGTGATCGCTTTAAGCGATGCGGTGATTATCCCCCAAGCGGATTTAAAAAGCGGC
TCTATGAGCAGCGCTAGACTCGCCCAAAAATACCAAAAACCCTTATTTGTTTTGCCCCAGCGCTTAAATGAGAGCGATGG
CACTAATGAGCTTTTAGAAAAAGGGCAGGCTCAAGGGATATTTAATATTCAAAATTTTATAAATACCCTTTTAAAAGACC
ACCATTTAAAAGAAATGCCTGAAATCAAAGATGAATTTTTGGAATATTGCGCCAAAAACCCTAGCTATGAAGAGGCGTAT
CTCAAATTTGGGGATAAGCTTTTAGAATACGAGCTTTTGGGCAAGATTAAACGCATCAATCATATCGTGGTGTTAGTGTG
A

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (11-197)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Helicobacter pylori 26695	96.226	99.624	0.959
dprA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	48.673	84.962	0.414