Detailed information NTG0046862

Bioinformatically predicted

Overview

• Name: comH
• Type: Machinery gene
• Locus tag: HPF30_RS07230
• Genome accession: NC_017365
• Coordinates: 1487305..1488744 (-)
• Length: 479 a.a.
• NCBI ID: WP_000751667.1
• Uniprot ID: -
• Organism: Helicobacter pylori F30
• Function: import of DNA into the periplasm (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1482305..1493744

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HPF30_RS07205 (HPF30_1395)	recG	1483439..1485304 (-)	1866	WP_001158387.1	ATP-dependent DNA helicase RecG	-
HPF30_RS07210 (HPF30_1396)	-	1485386..1485739 (+)	354	WP_000837006.1	hypothetical protein	-
HPF30_RS07215 (HPF30_1397)	-	1485743..1486378 (+)	636	WP_000668028.1	outer membrane protein	-
HPF30_RS07220 (HPF30_1398)	-	1486375..1487127 (-)	753	WP_000767571.1	exodeoxyribonuclease III	-
HPF30_RS07230 (HPF30_1399)	comH	1487305..1488744 (-)	1440	WP_000751667.1	hypothetical protein	Machinery gene
HPF30_RS07235 (HPF30_1400)	dnaA	1488965..1490332 (-)	1368	WP_000380568.1	chromosomal replication initiator protein DnaA	-
HPF30_RS07240 (HPF30_1401)	-	1490484..1491020 (+)	537	WP_000922947.1	purine-nucleoside phosphorylase	-
HPF30_RS07245 (HPF30_1402)	-	1491067..1491306 (+)	240	WP_000461845.1	DUF2443 domain-containing protein	-
HPF30_RS07250 (HPF30_1403)	glmS	1491307..1493100 (+)	1794	WP_000334371.1	glutamine--fructose-6-phosphate transaminase (isomerizing)	-

Sequence

Protein

• Length: 479 a.a.
• Molecular weight: 54984.05 Da
• Isoelectric Point: 7.4581

>NTDB_id=46862 HPF30_RS07230 WP_000751667.1 1487305..1488744(-) (comH) [Helicobacter pylori F30]
MKKTLCLSFFLTFSNPLQALVIELLEEIKTSPHKGTFKAKVLDSKEPRQVLGVYNISPHKKLTLTITHISTAIVYQPLDE
KLSLETTLNPNRPTIPRNTQIVFSSKELKESHPHQMPSLNAPMQKPQNKPNSSQQSLQNFSYPESKLGSKNPKNSLLQPL
ATPNKISSANEVKAPTNDTKPPLKHFSEDQENNLFITPPTEKTLPNNTPNANINEHNESNENRDSVEKQAIRDPNVKEFA
CGKWVYDDENLQAYRPSILKRIDEDKQTATDITPCDYSNAENKSGKITTPYTKISVHKTEPLEEPQTFEAKNNFTILQAR
SSTEKCKRARARKDGTTRQCYLIEEPLKQAWESKYEITTQLVKATYERPKQDDQIEPTFYETSELAYSSTRKSEIMHNEL
NLNEKFMEFVEVYEGHYLNDIVKESSEYKEWVKNHVRFKEGVCMVLEIEEQPRAKSTPLSIENSRVVCVKKGNYLFNEV

Nucleotide

• Length: 1440 bp

>NTDB_id=46862 HPF30_RS07230 WP_000751667.1 1487305..1488744(-) (comH) [Helicobacter pylori F30]
ATGAAAAAAACCCTTTGTCTGTCTTTCTTTCTAACTTTCTCTAACCCTCTTCAAGCCCTTGTGATCGAGCTTTTAGAAGA
AATCAAAACTTCGCCGCATAAAGGCACTTTTAAGGCTAAAGTCCTTGATTCTAAAGAACCAAGACAAGTTTTAGGCGTTT
ATAATATCTCCCCACACAAAAAACTCACGCTCACTATCACCCACATATCCACTGCAATTGTCTATCAACCCCTTGATGAA
AAACTTTCTTTAGAAACGACCTTAAACCCTAACCGCCCTACTATTCCCAGAAACACCCAAATTGTTTTTTCTTCAAAAGA
ATTGAAAGAGTCGCACCCGCACCAAATGCCTTCTTTAAACGCGCCCATGCAAAAACCACAAAACAAACCCAATTCATCGC
AACAATCTCTTCAAAACTTTTCTTACCCAGAGTCCAAACTAGGCTCTAAAAACCCTAAAAACAGCCTTTTACAGCCTTTA
GCCACTCCTAATAAAATAAGCTCAGCTAATGAAGTCAAAGCACCAACAAACGACACTAAACCCCCTTTAAAGCATTTTTC
AGAAGATCAAGAAAACAACCTCTTTATAACGCCACCCACTGAAAAAACGCTCCCTAACAACACTCCTAACGCTAATATTA
ATGAACACAATGAAAGTAATGAGAATAGGGATAGTGTGGAAAAACAAGCGATTAGAGATCCTAATGTTAAAGAATTTGCG
TGCGGGAAGTGGGTCTATGATGATGAAAATTTACAAGCCTATCGCCCAAGCATTTTAAAACGCATTGATGAAGACAAACA
GACTGCGACAGACATTACCCCTTGCGACTACAGCAACGCTGAAAATAAAAGCGGTAAAATCACTACCCCCTATACTAAAA
TCTCTGTTCATAAAACAGAGCCTTTAGAAGAGCCGCAAACCTTTGAAGCTAAAAACAATTTTACCATTCTCCAAGCCAGA
AGCTCTACAGAAAAATGCAAAAGGGCTAGAGCACGAAAAGACGGCACGACTAGGCAATGCTATCTGATAGAAGAGCCTTT
AAAACAAGCGTGGGAGAGTAAGTATGAAATCACCACGCAATTAGTGAAAGCCACTTATGAGCGCCCCAAACAAGACGATC
AAATAGAGCCGACTTTTTATGAAACCAGCGAATTGGCTTATTCTTCCACACGAAAAAGCGAAATAATGCATAATGAATTG
AATTTGAATGAAAAGTTCATGGAATTTGTGGAAGTGTATGAGGGGCATTATTTAAACGATATAGTCAAAGAAAGCAGTGA
ATACAAAGAATGGGTTAAAAACCATGTGCGCTTTAAAGAAGGGGTGTGCATGGTTTTAGAAATAGAAGAGCAACCACGAG
CTAAAAGCACGCCCTTGAGTATTGAAAATTCTCGTGTTGTTTGTGTCAAAAAGGGGAATTATTTATTCAACGAAGTTTAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comH	Helicobacter pylori 26695	92.902	100	0.929