Detailed information NTG0046820

Bioinformatically predicted

Overview

• Name: comH
• Type: Machinery gene
• Locus tag: HPSA_RS07035
• Genome accession: NC_017361
• Coordinates: 1472768..1474210 (-)
• Length: 480 a.a.
• NCBI ID: WP_000748930.1
• Uniprot ID: -
• Organism: Helicobacter pylori SouthAfrica7
• Function: import of DNA into the periplasm (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1467768..1479210

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HPSA_RS07010 (HPSA_07270)	recG	1468907..1470772 (-)	1866	WP_001156182.1	ATP-dependent DNA helicase RecG	-
HPSA_RS07015 (HPSA_07275)	-	1470854..1471201 (+)	348	WP_000837046.1	hypothetical protein	-
HPSA_RS07020 (HPSA_07280)	-	1471205..1471840 (+)	636	WP_000668055.1	outer membrane protein	-
HPSA_RS07025 (HPSA_07285)	-	1471837..1472589 (-)	753	WP_000767494.1	exodeoxyribonuclease III	-
HPSA_RS07035 (HPSA_07295)	comH	1472768..1474210 (-)	1443	WP_000748930.1	hypothetical protein	Machinery gene
HPSA_RS07045 (HPSA_07300)	dnaA	1474440..1475807 (-)	1368	WP_000380605.1	chromosomal replication initiator protein DnaA	-
HPSA_RS07050 (HPSA_07305)	-	1475961..1476503 (+)	543	WP_000922963.1	purine-nucleoside phosphorylase	-
HPSA_RS07055 (HPSA_07310)	-	1476538..1476777 (+)	240	WP_000462051.1	DUF2443 family protein	-
HPSA_RS07060 (HPSA_07315)	glmS	1476778..1478571 (+)	1794	WP_000334459.1	glutamine--fructose-6-phosphate transaminase (isomerizing)	-

Sequence

Protein

• Length: 480 a.a.
• Molecular weight: 54786.77 Da
• Isoelectric Point: 6.7659

>NTDB_id=46820 HPSA_RS07035 WP_000748930.1 1472768..1474210(-) (comH) [Helicobacter pylori SouthAfrica7]
MKKSLCLSFFLAFSNPLQALVIELLEEIKTSPHKGTFKAKVLDSKEPRQVLGVYNISPHKKLTLTITHISAAIIYQPLDE
KLSLETTLNPNRPIIPKNTQIVFSSELKEPRPNQIPSLNAPMQKPQNKPNPSQQLPQNFSYPESKLGPKNSKNSLLQPLA
TPSKISSANETKTPTNDTKPPLKHSSEDQENNLFITPPTEKTPPNNNASHADTHENNESNEDSRDNVEKQAVRDPNVKEF
ACGKWVYDDENLQAYRPSILKRVDADKQTTTDITPCDYSMAENKSGKIITPYTKISVQKTEPLEEPQTFEAKNNFAILQA
RSTTEKCKRARARKDGTIRQCYLIEEPLKQAWESEYEITTQLVKAIYERPKQDDQVEPTFYETSELAYSSTRKSEITHNE
LNLNEKFMEFVEVYEGHYLNDVIKESSEYKEWVKNHVRFKEGVCVALEIEEQPRAKSTPLSIENSRVVCVKKGNYLFNEV

Nucleotide

• Length: 1443 bp

>NTDB_id=46820 HPSA_RS07035 WP_000748930.1 1472768..1474210(-) (comH) [Helicobacter pylori SouthAfrica7]
ATGAAAAAATCCCTATGTTTGTCTTTTTTCCTCGCTTTTTCTAACCCCCTCCAAGCTCTTGTCATCGAGCTTTTAGAAGA
AATCAAAACTTCGCCCCATAAAGGCACATTTAAAGCTAAAGTCCTTGATTCTAAAGAGCCAAGACAGGTTTTAGGAGTTT
ATAATATCTCCCCGCACAAAAAACTCACGCTCACCATCACTCACATATCCGCTGCAATTATCTATCAACCCCTTGATGAA
AAACTTTCCTTAGAAACGACCTTAAACCCTAATCGCCCCATCATTCCTAAAAACACGCAAATCGTTTTTTCTTCAGAATT
GAAAGAACCACGCCCCAACCAAATACCCTCTTTAAACGCACCCATGCAAAAACCACAAAATAAACCCAATCCATCGCAAC
AACTTCCTCAAAACTTTTCTTATCCAGAATCCAAATTAGGCCCTAAAAACTCTAAAAACAGCCTTTTACAACCTTTAGCA
ACCCCTAGCAAAATAAGCTCTGCCAATGAAACTAAAACGCCAACAAACGACACTAAACCCCCTTTAAAACATTCTTCAGA
AGATCAAGAAAACAACCTTTTTATAACGCCGCCCACTGAAAAAACGCCCCCCAATAACAACGCTTCTCATGCTGATACTC
ATGAAAATAATGAAAGCAACGAAGATAGTAGGGATAATGTGGAAAAACAAGCCGTTAGAGATCCCAATGTCAAGGAATTT
GCGTGCGGAAAGTGGGTTTATGATGATGAAAATTTGCAAGCCTATCGCCCAAGCATTTTAAAGCGCGTTGATGCAGACAA
ACAGACCACCACAGACATTACCCCTTGCGATTACAGCATGGCTGAAAATAAAAGCGGTAAAATCATTACCCCTTATACTA
AAATCTCTGTTCAAAAAACAGAGCCTTTAGAAGAGCCTCAAACTTTTGAAGCTAAAAACAATTTCGCTATTCTTCAAGCC
AGAAGCACCACAGAAAAATGCAAAAGGGCTAGAGCGCGAAAAGACGGCACCATTAGGCAATGCTATTTGATAGAAGAGCC
TTTAAAACAAGCGTGGGAAAGTGAGTATGAAATCACCACGCAATTAGTGAAAGCCATTTATGAGCGCCCCAAACAAGACG
ACCAAGTAGAGCCGACTTTTTATGAAACCAGCGAATTGGCTTATTCTTCCACACGAAAAAGCGAAATAACGCACAATGAG
TTGAATTTGAATGAAAAGTTTATGGAATTTGTGGAAGTGTATGAGGGGCATTATTTAAACGATGTGATCAAAGAAAGCAG
TGAATACAAAGAATGGGTTAAAAACCATGTGCGATTCAAAGAGGGGGTGTGTGTTGCTTTAGAAATAGAAGAGCAGCCAC
GAGCCAAAAGCACGCCTTTAAGTATTGAAAACTCTCGTGTTGTTTGTGTCAAAAAAGGGAATTATTTATTCAATGAAGTT
TAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comH	Helicobacter pylori 26695	91.268	100	0.915