Detailed information
Bioinformatically predicted
Overview
| Name | comFC | Type | Machinery gene |
| Locus tag | HPSA_RS06770 | Genome accession | NC_017361 |
| Coordinates | 1414166..1414741 (-) | Length | 191 a.a. |
| NCBI ID | WP_001203659.1 | Uniprot ID | E8QTZ0 |
| Organism | Helicobacter pylori SouthAfrica7 | ||
| Function | ssDNA transport into the cell (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1409166..1419741
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HPSA_RS06760 | - | 1410868..1412098 (-) | 1231 | Protein_1310 | restriction endonuclease subunit S | - |
| HPSA_RS06765 (HPSA_06995) | - | 1412095..1414134 (-) | 2040 | WP_001147716.1 | class I SAM-dependent DNA methyltransferase | - |
| HPSA_RS06770 (HPSA_07000) | comFC | 1414166..1414741 (-) | 576 | WP_001203659.1 | ComF family protein | Machinery gene |
| HPSA_RS06775 (HPSA_07005) | tmk | 1414729..1415304 (-) | 576 | WP_000289688.1 | dTMP kinase | - |
| HPSA_RS06780 (HPSA_07010) | coaD | 1415306..1415779 (-) | 474 | WP_014534877.1 | pantetheine-phosphate adenylyltransferase | - |
| HPSA_RS06785 (HPSA_07015) | - | 1415779..1416342 (-) | 564 | WP_000780138.1 | UbiX family flavin prenyltransferase | - |
| HPSA_RS06790 (HPSA_07025) | flgA | 1416352..1417008 (-) | 657 | WP_000688541.1 | flagellar basal body P-ring formation chaperone FlgA | - |
| HPSA_RS06795 (HPSA_07030) | - | 1417005..1419050 (-) | 2046 | WP_000344827.1 | ATP-dependent helicase | - |
Sequence
Protein
Download Length: 191 a.a. Molecular weight: 21372.97 Da Isoelectric Point: 9.2851
>NTDB_id=46819 HPSA_RS06770 WP_001203659.1 1414166..1414741(-) (comFC) [Helicobacter pylori SouthAfrica7]
MRCLTCLRLSFKPLCQRCLNDLPLSLKVRVLEGVSVYSFYAYSEIEELIKSKYALIGSRILPLLSQKAGAEFVKILQEKG
LNIPLYGIAIDDKIKSFYSHSAALLKGFCQGHLKATYGNLRAANAVSYAGKSLDFRTNNPRNFTFKGDKNLDYFLLDDII
TTGTTLKEALKYLKSLNIKAHFAIALCDADE
MRCLTCLRLSFKPLCQRCLNDLPLSLKVRVLEGVSVYSFYAYSEIEELIKSKYALIGSRILPLLSQKAGAEFVKILQEKG
LNIPLYGIAIDDKIKSFYSHSAALLKGFCQGHLKATYGNLRAANAVSYAGKSLDFRTNNPRNFTFKGDKNLDYFLLDDII
TTGTTLKEALKYLKSLNIKAHFAIALCDADE
Nucleotide
Download Length: 576 bp
>NTDB_id=46819 HPSA_RS06770 WP_001203659.1 1414166..1414741(-) (comFC) [Helicobacter pylori SouthAfrica7]
ATGCGTTGTTTAACTTGCTTAAGGCTCTCTTTCAAGCCCCTTTGCCAGCGTTGTTTGAACGATTTGCCCTTAAGCTTAAA
AGTAAGGGTTTTAGAGGGCGTGAGCGTGTATAGTTTTTACGCTTATAGCGAAATAGAAGAACTCATTAAAAGCAAATACG
CGCTGATTGGCTCTCGCATTTTGCCCTTGCTTTCTCAAAAAGCCGGCGCGGAATTTGTGAAAATCTTGCAAGAAAAAGGC
TTGAATATCCCCCTTTATGGCATCGCTATTGACGATAAGATCAAATCCTTTTACTCGCATTCAGCCGCGCTTTTAAAAGG
CTTTTGTCAAGGCCATTTAAAAGCCACTTACGGGAATTTAAGGGCGGCTAATGCTGTTTCGTATGCCGGGAAAAGTTTAG
ACTTTCGCACCAATAACCCACGGAATTTCACTTTCAAAGGCGATAAGAATTTAGATTATTTCTTGCTAGATGATATTATC
ACCACCGGCACCACCCTAAAAGAAGCCTTAAAATACCTTAAATCCTTAAACATTAAAGCGCATTTTGCGATCGCACTTTG
TGATGCAGATGAATGA
ATGCGTTGTTTAACTTGCTTAAGGCTCTCTTTCAAGCCCCTTTGCCAGCGTTGTTTGAACGATTTGCCCTTAAGCTTAAA
AGTAAGGGTTTTAGAGGGCGTGAGCGTGTATAGTTTTTACGCTTATAGCGAAATAGAAGAACTCATTAAAAGCAAATACG
CGCTGATTGGCTCTCGCATTTTGCCCTTGCTTTCTCAAAAAGCCGGCGCGGAATTTGTGAAAATCTTGCAAGAAAAAGGC
TTGAATATCCCCCTTTATGGCATCGCTATTGACGATAAGATCAAATCCTTTTACTCGCATTCAGCCGCGCTTTTAAAAGG
CTTTTGTCAAGGCCATTTAAAAGCCACTTACGGGAATTTAAGGGCGGCTAATGCTGTTTCGTATGCCGGGAAAAGTTTAG
ACTTTCGCACCAATAACCCACGGAATTTCACTTTCAAAGGCGATAAGAATTTAGATTATTTCTTGCTAGATGATATTATC
ACCACCGGCACCACCCTAAAAGAAGCCTTAAAATACCTTAAATCCTTAAACATTAAAGCGCATTTTGCGATCGCACTTTG
TGATGCAGATGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comFC | Helicobacter pylori 26695 |
92.147 |
100 |
0.921 |
| ctsW | Campylobacter jejuni subsp. jejuni 81-176 |
35.938 |
100 |
0.361 |