Detailed information NTG0468166

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: I6J38_RS07180
• Genome accession: NZ_CP069558
• Coordinates: 1439345..1440442 (+)
• Length: 365 a.a.
• NCBI ID: WP_020998128.1
• Uniprot ID: -
• Organism: Streptococcus constellatus strain FDAARGOS_1208
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1434345..1445442

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I6J38_RS07155 (I6J38_07155)	pgsA	1434815..1435354 (-)	540	WP_006270330.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
I6J38_RS07160 (I6J38_07160)	rodZ	1435365..1436186 (-)	822	WP_020998125.1	cytoskeleton protein RodZ	-
I6J38_RS07165 (I6J38_07165)	yfmH	1436245..1437540 (-)	1296	WP_006268797.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
I6J38_RS07170 (I6J38_07170)	yfmF	1437540..1438787 (-)	1248	WP_020998126.1	EF-P 5-aminopentanol modification-associated protein YfmF	-
I6J38_RS07175 (I6J38_07175)	yaaA	1438962..1439342 (+)	381	WP_020998127.1	S4 domain-containing protein YaaA	-
I6J38_RS07180 (I6J38_07180)	recF	1439345..1440442 (+)	1098	WP_020998128.1	DNA replication/repair protein RecF	Machinery gene
I6J38_RS07185 (I6J38_07185)	guaB	1440527..1442008 (-)	1482	WP_003071643.1	IMP dehydrogenase	-
I6J38_RS07190 (I6J38_07190)	trpS	1442146..1443171 (-)	1026	WP_006268883.1	tryptophan--tRNA ligase	-
I6J38_RS07195 (I6J38_07195)	galE	1443253..1444248 (-)	996	WP_020998129.1	UDP-glucose 4-epimerase GalE	-
I6J38_RS07200 (I6J38_07200)	-	1444268..1444957 (-)	690	WP_006268827.1	triose-phosphate isomerase	-

Sequence

Protein

• Length: 365 a.a.
• Molecular weight: 42277.89 Da
• Isoelectric Point: 9.4521

>NTDB_id=468166 I6J38_RS07180 WP_020998128.1 1439345..1440442(+) (recF) [Streptococcus constellatus strain FDAARGOS_1208]
MWLKNLQIQHFRNYELIEIDFHPGLNIFLGQNAQGKTNILEAIYFLALTRSHRTRSDKDLIYFSKDTLKVSGQLVKQTGK
ISLEIDLTPKGRITKVNHLKQSKLSDYIGNMNIVLFAPEDLQLIKGAPALRRKFVDIELGQIKPIYLSDLSHYHHVLKQR
NTYLKTAKTIDETFLTVLDDQLVEFGCRIMQHRIEFLKKLEYFGQQKHLELSNNLENLTIKYCSSIRLSDFNKLEEAFRI
ALKQSRSRDLFKKTTGIGPHRDDIAFYINDMNANFGSQGQHRSVVLSLKLAEIELMETVTKEKPILLLDDVMSELDNNRQ
LNLLESISQNIQTFITTTTLEHLQSMPSDIKIFSIHEGKLTKKNM

Nucleotide

• Length: 1098 bp

>NTDB_id=468166 I6J38_RS07180 WP_020998128.1 1439345..1440442(+) (recF) [Streptococcus constellatus strain FDAARGOS_1208]
ATGTGGTTAAAAAACTTACAAATTCAACATTTTCGCAATTACGAGCTAATTGAAATAGACTTTCATCCTGGACTCAACAT
TTTTCTAGGTCAAAATGCTCAAGGAAAAACAAATATTTTAGAAGCTATCTATTTTCTTGCATTGACACGGAGTCATCGAA
CTCGTTCAGATAAAGATTTAATTTATTTTTCTAAAGACACCTTAAAAGTATCTGGACAACTTGTCAAGCAAACTGGAAAG
ATTTCTTTAGAGATTGACTTGACACCAAAAGGAAGAATTACAAAGGTTAATCATCTAAAACAAAGCAAATTATCAGATTA
CATTGGAAATATGAATATTGTTTTGTTTGCTCCAGAAGATTTACAATTGATTAAAGGAGCTCCAGCCCTTAGACGCAAAT
TTGTTGATATAGAGTTGGGGCAAATTAAACCAATTTATTTATCTGATTTATCACATTATCATCATGTTCTAAAACAGAGA
AATACTTATTTAAAGACAGCAAAAACAATAGATGAGACTTTTTTAACTGTCTTGGATGATCAGTTAGTAGAGTTTGGTTG
CCGCATTATGCAGCATCGAATAGAATTTCTCAAAAAATTAGAATACTTTGGTCAGCAAAAACATTTGGAACTCTCAAATA
ATTTAGAAAATTTAACTATTAAATACTGCTCTTCTATTCGACTTTCAGATTTCAATAAACTAGAAGAAGCTTTTCGAATT
GCATTAAAACAAAGTCGTAGCAGAGATTTATTTAAAAAAACTACTGGAATTGGTCCCCATCGAGATGATATTGCTTTTTA
TATCAATGATATGAATGCTAATTTTGGTAGTCAAGGACAACATCGAAGCGTAGTCTTATCTCTCAAACTGGCAGAAATTG
AGCTTATGGAAACTGTTACTAAAGAAAAACCAATTCTTCTACTTGACGATGTCATGAGTGAACTTGACAATAACCGTCAA
CTTAATCTACTTGAATCTATTTCCCAAAACATCCAAACATTTATCACCACAACAACTCTAGAACATTTACAAAGCATGCC
TTCTGATATTAAAATTTTCTCAATTCACGAAGGAAAATTAACAAAAAAAAACATGTAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-358)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	70.083	98.904	0.693
recF	Bacillus subtilis subsp. subtilis str. 168	44.324	100	0.449